KEGG   Thioalkalivibrio sp. K90mix: TK90_2263
Entry
TK90_2263         CDS       T01174                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
  KO
K05522  endonuclease VIII [EC:3.2.2.- 4.2.99.18]
Organism
tkm  Thioalkalivibrio sp. K90mix
Pathway
tkm03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tkm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    TK90_2263
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tkm03400]
    TK90_2263
Enzymes [BR:tkm01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     TK90_2263
DNA repair and recombination proteins [BR:tkm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     TK90_2263
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco zf-FPG_IleRS Nudix_N_2 DZR
Other DBs
NCBI-ProteinID: ADC72753
UniProt: D3SDF4
Position
complement(2381930..2382772)
AA seq 280 aa
MPEGDTIHKLARVLGPALAGAPLESVATRARRGAVLVEHGAMTVRRVSARGKHLLIALED
AAGRAWRLRTHLGMYGTWHQYAPGAAWHKPDHQAWAVLRLADRVLVCFHPRELAWQLLSE
GRADPERLDARVGPDLLDATVELDEVVQRIRTNCDPARPILDVLLDQSLAAGIGNIYKSE
VLFLQGRYPLTPVGAITDRDLLDIYCDSARLLRRNLKPGPRITRARAETDEYLHVYGRGG
QACRTCGTPVERALLGEHLRATYWCPSCQPGNLDRPRDHQ
NT seq 843 nt   +upstreamnt  +downstreamnt
atgcccgagggcgataccatccacaagctggcccgggtgcttggtccggcgttggctggt
gcccccctggagtcggtggcgacgcgcgcgcggcgcggtgcggtactggtggagcatggg
gcgatgaccgtgcgtagggtgagcgctcgtggcaagcatctgctgatcgcgctggaggat
gccgcgggccgggcctggcgcctccgcacgcatttggggatgtacgggacctggcaccag
tacgcgcccggggcggcctggcacaagccggaccatcaggcctgggccgtgctgcgcctg
gcggaccgagtgctggtctgtttccatccgcgtgagctcgcctggcagttattgtcggag
gggcgagccgatccggagcgactggacgcgcgggtagggccggatcttctggatgcgact
gtggagctggatgaggtcgtccaacgcatccgcacgaactgtgatcccgcgcggccgatc
ctggatgtactgctcgatcagtcgctggcggcgggcattggcaacatctacaagtcggag
gtgctgttcctgcaaggccggtacccgctgacgccggtcggcgcgatcacggatcgcgac
ttgctggatatctactgcgattccgcacgtctgttgcgacgcaacctgaagccagggccg
cgcattacgcgcgcgcgggccgagacggacgagtacctgcatgtgtacgggcgtgggggc
caggcctgccggacgtgcgggacgccagtggaacgggcgttactgggcgagcacctgcgc
gccacctactggtgcccctcctgccagccggggaacctcgacaggccccgcgaccaccaa
taa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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