KEGG   Thermococcus kodakarensis: TK1495
Entry
TK1495            CDS       T00226                                 
Name
(GenBank) LSU ribosomal protein L40E
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
tko  Thermococcus kodakarensis
Pathway
tko03010  Ribosome
Brite
KEGG Orthology (KO) [BR:tko00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    TK1495
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:tko03011]
    TK1495
   04121 Ubiquitin system [BR:tko04121]
    TK1495
Ribosome [BR:tko03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    TK1495
  Archaea
    TK1495
Ubiquitin system [BR:tko04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   TK1495
SSDB
Motif
Pfam: zinc_ribbon_2 DZR Ribosomal_L40e UPF0547 Toxin_5 zf-ribbon_3
Other DBs
NCBI-ProteinID: BAD85684
UniProt: Q5JJD3
Structure
Position
complement(1322780..1322935)
AA seq 51 aa
MARFPEAEARIFRKLVCMRCGATNPWGAKKCRKCGYKGLRPKAREPRGGGR
NT seq 156 nt   +upstreamnt  +downstreamnt
atggcgagattccctgaggctgaggctaggatctttaggaaactcgtgtgcatgcgctgc
ggtgccactaacccatggggcgcaaagaagtgcagaaagtgcggctacaagggccttcgc
ccgaaggccagagaaccgcgtggtggaggacgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
3D Structure (3)   
   PDB (3)   
Protein domain (6)   
   Pfam (6)   
All databases (23)   

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