KEGG   Thermovirga lienii: Tlie_0757
Entry
Tlie_0757         CDS       T01644                                 
Name
(GenBank) Endonuclease IV
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
tli  Thermovirga lienii
Pathway
tli03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tli00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Tlie_0757
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tli03400]
    Tlie_0757
Enzymes [BR:tli01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     Tlie_0757
DNA repair and recombination proteins [BR:tli03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     Tlie_0757
SSDB
Motif
Pfam: AP_endonuc_2 PRMT5_TIM
Other DBs
NCBI-ProteinID: AER66490
UniProt: G7V9E0
Position
792349..793191
AA seq 280 aa
MSLIGAHMSIAGGLWKAIERGELLGCEAIQIFTKNQLQWYSSPLPQHIAERFLLVWSRSH
IRKVVAHASYLINLAGDEGVRRKSIESLVQEVKRCDQLGIDELVLHPGSHRGKGVEEGLR
LLSEALRDVLVRTEETRVRILLETMAGTGDGLGSTLEELEWVLNFMDRDPRLGVCVDTCH
VFASGYELRTAFAYEKLVQKLEKMFGLERIGCWHLNDSKEGRGSKKDRHHHIGEGEIGEQ
VFARIVSDPRWEDVPCILETPKENGSDVRNLTLLRKMRGS
NT seq 843 nt   +upstreamnt  +downstreamnt
atgtctttaataggagcccatatgtccatagcgggcggtctgtggaaagccatagaaaga
ggagaactgttgggttgtgaagcaatccagatctttaccaagaaccagctgcaatggtat
tcgtcccccttgccccaacacattgcagaaaggtttctgttggtctggagtcgtagccat
atccgcaaggtagtggctcatgcttcttatttgattaatttggctggggacgagggagta
agaaggaagagtatagagtccttggttcaggaggtaaaaaggtgtgatcaacttggaatt
gacgagttggttttacaccctggatcccacaggggaaaaggggtagaagaagggctcaga
ttgctttctgaagctttgcgtgatgtgcttgtcaggactgaggagaccagggttaggatt
cttcttgaaaccatggcaggaactggagatggtttaggttccactcttgaggagctggaa
tgggttttgaatttcatggatagggatcccagacttggtgtgtgcgtcgacacttgtcat
gtttttgcttctggttatgagttgcgcacggcctttgcgtatgagaagcttgtgcagaag
ttggagaagatgttcggactggaaaggataggatgttggcatcttaatgacagcaaggaa
ggacgaggaagcaaaaaggacaggcaccaccatattggagagggtgaaataggagagcaa
gttttcgccaggatagtaagcgaccctagatgggaagatgtgccctgtatcttggaaacg
ccgaaagaaaatggatcagatgtacggaatctgaccttgttgaggaagatgagaggctct
taa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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