KEGG   Thermovirga lienii: Tlie_1072
Entry
Tlie_1072         CDS       T01644                                 
Name
(GenBank) HhH-GPD family protein
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
tli  Thermovirga lienii
Pathway
tli03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tli00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Tlie_1072
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tli03400]
    Tlie_1072
Enzymes [BR:tli01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Tlie_1072
DNA repair and recombination proteins [BR:tli03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Tlie_1072
 Prokaryotic type
     Tlie_1072
SSDB
Motif
Pfam: HhH-GPD EndIII_4Fe-2S HHH HHH_5 RecR_HhH DUF4295
Other DBs
NCBI-ProteinID: AER66805
UniProt: G7VAA5
Position
complement(1133089..1133823)
AA seq 244 aa
MKTRTNRIVKSIKTDKAPIYAHKEKIILCLDLLEEKWGNEGRPSYESFEDPIDGLIKTVL
SQNTNDKNRDMAWESLKDRFPSWQQVIDAKVEEVADAIRSAGIANVKAQRIKKILATVNG
VWGSCSLKGLKRLEKEEIISFLSSLPGVGPKTIACVLLFDLGIPAFPVDTHVARLSKRLG
FVGGNTLPEDIEKILEELVPEERFLGGHLNMIAHGRAICKALNPRCQLCSLAHLCEHLNS
KGAA
NT seq 735 nt   +upstreamnt  +downstreamnt
atgaagacaaggacaaatcgaatagttaaaagcataaaaacggacaaagccccaatatac
gctcacaaggaaaagataatactctgcctggatcttttggaagaaaagtggggcaacgag
ggacggccttcgtatgagtcctttgaagatcctattgatggtttgataaaaacggtttta
tcgcaaaacaccaacgataaaaaccgggacatggcatgggaatcgctaaaggataggttt
ccttcatggcaacaagtcattgacgcgaaagtcgaggaagtagctgacgcaataagaagc
gcgggtattgctaacgtcaaggctcaaagaataaagaaaatcttggccacagtgaacggc
gtttggggatcttgcagtcttaagggactaaaaagactggaaaaagaggaaataataagt
tttttaagctctttgcctggagtgggtccaaagacaatagcttgcgtgttgttgtttgat
ctgggcattccagcattccctgtggatactcatgtcgctaggctctcaaaaaggttgggc
tttgttggaggtaatactctaccggaagatatcgaaaaaattttggaggaattggtacca
gaggaacgattcctgggaggacaccttaacatgatagcccacggtagggccatttgtaag
gccttaaatcccaggtgtcaattatgctctctggcgcacctatgtgaacatttaaattca
aagggagcagcttga

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