KEGG   Thermosulfurimonas marina: FVE67_09115
Entry
FVE67_09115       CDS       T06536                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
tmai  Thermosulfurimonas marina
Pathway
tmai02020  Two-component system
tmai02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:tmai00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    FVE67_09115 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    FVE67_09115 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tmai03021]
    FVE67_09115 (rpoN)
Transcription machinery [BR:tmai03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     FVE67_09115 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID Sigma70_r4 HTH_23 HTH_Crp_2 HTH_IclR HTH_38 HTH_6 HTH_Tnp_ISL3 LacI HTH_AsnC-type HTH_3 HTH_31 HTH_AraC HTH_32 HTH_21
Other DBs
NCBI-ProteinID: QJA06937
UniProt: A0A6H1WUR1
Position
1754657..1756039
AA seq 460 aa
MALELKTQLKLRPELILTPQLRLALKLLQMNRLELEEYLRTEVEKNPVLELREEDLSLEA
LAPTGELHQDEEHPWEALFAEEFSPYPSFSFEEPEEISWESRLKQEEGLYEHLRWQLTLA
ALSEEDLRLAEYLLRNLDERGYLTLSPAEAARDLGVSSERVEEVRRKIQFFDPVGVASLS
VEECLLVQLDYLGFSDSLAARLVREHFRDLAKGVDFLAQKLQVPPEEVAEALEIIRGLEP
FPGRAFSSGQTLYLTPDVIFYKEGGRWRVRLYEEGLPRLRISPYYRRLLADPTVPRKVKF
FLRDKLRAAEWLMKSLDQRGKTLLRVAEVLADLQRDFLEKGPAYLRPLNLREVAERVGVH
ESTVSRVTHRKYAETPNGLVELKSFFPSGLKKIGGGAVSSEAVKEYLRELILKENPQKPY
TDQELARMLSQKYGVKIARRTVAKYREILGIPSARVRKKV
NT seq 1383 nt   +upstreamnt  +downstreamnt
atggccctagaactcaagacccagctcaaactaaggccggaactcatcttgacccctcag
ctccggctggccttaaagcttcttcagatgaatcgtctggaacttgaagaatatttacgc
acggaggtggagaagaatccggtcctggaactcagggaggaagacctgtctctagaggcc
ttggcccctacgggagagctacaccaggacgaagagcatccctgggaggccctctttgcg
gaggagttttctccttaccccagttttagtttcgaagagccggaggagatttcctgggag
tcccgcctcaaacaagaagagggactttatgagcatctgcgctggcaactgactctggcg
gccctttccgaagaggatttacgcctggcggaatatctcctgcggaatctcgatgagcgg
gggtatttgaccctcagtccggccgaagcggcgcgggacctgggagtttcttcagaacgg
gtggaagaggtccggagaaaaatccagtttttcgatccggtgggagtggcctccctttcg
gtggaagaatgtctcctggtccagcttgattatctgggattttcggatagtttggccgcg
cgcttggtgcgagagcattttcgggatctggccaagggggtggattttttggcgcagaaa
ttacaggttcccccggaagaagtggccgaggccctggagatcattcgggggcttgagccc
tttcctggacgggccttttcttcgggccagaccctttatctcactccggatgtcattttt
tacaaggagggagggcgttggcgggttcggctttatgaggaaggccttcctcgtctgcgc
atcagcccttattatcgacgcctcctggctgatcccaccgtgccccggaaggtaaagttt
ttcttgagggacaaattgcgggccgcggaatggctcatgaaaagcctggatcaacgggga
aagacccttctgcgggtggccgaagtcctggcagatctacagagggattttttggagaag
ggcccggcctatcttcggcccctcaatctccgagaagtggccgaaagggtaggggtgcat
gagtccacggtaagtcgggtcacccatcgcaagtacgccgaaacccctaacggtctggtg
gagctcaaatctttcttcccctcgggtctgaaaaaaattgggggaggggcggtctcctcg
gaggccgtgaaagagtacctgcgagagcttatattaaaagaaaacccacaaaagccttat
acggatcaagagttggcgcggatgctttctcaaaaatatggggttaaaattgcccgccga
accgtagccaaataccgggagatcctgggcatcccttcggccagggtccgtaaaaaagtc
tag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (25)   

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