KEGG   Thermosipho melanesiensis: Tmel_1736
Entry
Tmel_1736         CDS       T00550                                 
Name
(GenBank) excinuclease ABC, C subunit
  KO
K03703  excinuclease ABC subunit C
Organism
tme  Thermosipho melanesiensis
Pathway
tme03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tme00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Tmel_1736
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tme03400]
    Tmel_1736
DNA repair and recombination proteins [BR:tme03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Tmel_1736
SSDB
Motif
Pfam: UvrC_RNaseH_dom GIY-YIG HHH_5 HHH_2 UVR GIY_YIG_2 5_3_exonuc
Other DBs
NCBI-ProteinID: ABR31575
UniProt: A6LNS4
Position
complement(1725799..1727451)
AA seq 550 aa
MIDREILKNIPEKPGVYIFKRDKEYVYIGKSKNLKKRLNSHFSFKEEKSRLIVEESNKLE
TIIVKNEKESLLLEATLIYKYKPKYNVMLKESEPYPYIRISSDVFPYVEVTRNRDKDGKY
FGPYTNVKFTRLFLEVLQKILNFRTCKKNIEKIKKPCLNYYLKTCVAPCVDENKNFKMYG
EIIKRLEEVLSGDYEYIRNFIEAKMYHHAKMLDFENAAKYRDVLLAFNNIMINQGIVLRD
KRNVDYIVFKDNMFLVLKVRSGVLTSKLLYEASLTFEEFIYQFYYGMKSDLPNKIVVSKQ
INLNFDVPIIVCREEDDKYLLEIALENLTEHIKSINFSKDILIKMKEILNLKKIPFRIEG
TDISHRNGRFTVASLIVFENGYPKKDEYRRYKLGDILDDFESIRIFIRKRYTKHRPPDLF
FVDGGKGQVNAAIGEFNKMNIDIDVVGIAKEEEVIVTKNKSFKLDPTDVVLRTLIFVRDE
THRVANSFSGKLKNNEYKVSKLDSIKGIGPKRKKQLLMKFGTLKNIKSASLEELEEIVGK
TIALRIKEEL
NT seq 1653 nt   +upstreamnt  +downstreamnt
ttgatagatagagaaatattaaaaaatattcctgagaaacctggtgtatatatttttaaa
agggataaagaatatgtttatattggaaagtcgaaaaatttaaaaaagcgacttaattct
catttttcttttaaagaagaaaaaagtcggcttatagttgaagaatcaaataaattagag
actataatagtaaaaaatgagaaagaatcattgcttttagaagcaacattaatttacaaa
tataaaccaaagtataatgttatgctaaaagaaagtgaaccgtatccatacataagaatt
tcatctgatgtttttccttatgttgaagtaactagaaatagagataaagatggtaaatat
ttcgggccgtatacaaatgtaaaatttacaaggttgtttttagaagtcttgcaaaagatt
ttgaattttagaacgtgtaaaaaaaatattgagaaaataaaaaagccatgtttgaattat
tacttaaaaacgtgtgtagcgccgtgtgtagatgaaaacaaaaattttaaaatgtatggt
gagataattaaacgtttggaagaggttttaagtggtgattatgaatatattaggaatttt
attgaagcaaaaatgtaccatcatgcgaaaatgctagattttgagaatgcagcaaaatat
agagatgtgttactagcatttaataatattatgataaatcaggggattgttttaagggat
aaaagaaatgtggactacattgtttttaaagataacatgtttttagtcttaaaggttaga
agtggtgtgttaacttcaaaacttctttatgaagcttcattaacttttgaagaatttata
tatcagttttattatggtatgaaaagtgatttgccaaataaaatagttgtctcaaaacaa
attaatttgaattttgatgttccaataattgtgtgtagagaggaagacgataaatatctt
ttagaaatagctttagagaatttaactgagcatattaaatcaattaattttagtaaagat
attttaattaagatgaaagagattttaaatttaaaaaaaattccatttaggattgagggg
acagatatttcacatagaaatggtagatttacagttgcttcactgattgtttttgaaaat
ggatatccaaaaaaagatgaatatagaagatataagcttggggacattttagatgatttt
gaaagtattagaatttttattagaaaaagatatacaaaacaccgaccaccagatttattt
tttgtggatggtggtaagggacaagttaatgcagcaattggcgaatttaataaaatgaat
attgatatagatgttgttggaattgcaaaggaggaagaagtaatagttactaaaaataag
agctttaaacttgatccaactgatgttgtgttaagaactttaatttttgtaagagatgaa
actcatagagttgcaaattcttttagtggaaagttaaaaaataatgagtataaagttagt
aaattggatagtattaaaggaattgggccaaaaagaaaaaaacagttacttatgaaattt
ggaacactcaaaaacattaaaagtgcatcattagaggaacttgaagaaattgtaggaaaa
acaatagcgttaagaattaaggaagaattgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (41)   

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