KEGG   Thermosipho melanesiensis: Tmel_1916
Entry
Tmel_1916         CDS       T00550                                 
Name
(GenBank) Exodeoxyribonuclease VII
  KO
K03601  exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Organism
tme  Thermosipho melanesiensis
Pathway
tme03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tme00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    Tmel_1916
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tme03400]
    Tmel_1916
Enzymes [BR:tme01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     Tmel_1916
DNA repair and recombination proteins [BR:tme03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     Tmel_1916
SSDB
Motif
Pfam: Exonuc_VII_L
Other DBs
NCBI-ProteinID: ABR31748
UniProt: A6LP97
Position
complement(1898548..1899984)
AA seq 478 aa
MREFKDLIELNEYVTRVIDSTGLTSETFRFYADVVRANIHSSGLYIDVSQTYPVRNGTRN
IEITVYIPKYMYPRMLAAIGLRNAKGLVGKKWIFQGKLSFYKDRMSFTFFADTIAPVGES
EIEKRKKEILRELKLRNLLMLEKHDLSELPPIKKIAVISSKTAAGYEDFLKNLKVGYLYQ
PIVHLYESPMQGANTAAGIILALERIKRSNIDYNVVVIARGGGAKSDLMYFDDLALGVEI
ANFNNYCPVLSGIGHERDFTIPDYVAWKRFATPTEVARAISRQIDDNVRQIDDNWNDLKL
LMMNILKNISTLLNTQLVDYINKTLKVTFLGYEDLFENYYENLKNHLNYIFEFSSRKISE
DFLSFISQRMEGNLNAKKGELIGYAKLIEKDFALKISNKEALLNQIFQELLKKEELAPLL
FGGAIVMKGRKKISSVRKLRMGEKIEIYLKDGKINAKISNEKKKKKEELYGGHTLFRS
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgagggagtttaaggatttgattgaattaaatgaatatgtaaccagggtaatagattct
acgggccttacaagtgaaacatttagattttatgccgatgttgtaagagcaaatatacat
tctagtggattatatattgatgtttcacaaacgtatccagttagaaatggaacgaggaat
atcgaaattactgtatatattccaaagtacatgtatcctagaatgttagctgccattgga
ttaagaaatgcaaagggattagtggggaaaaagtggatttttcaaggaaaattatccttt
tataaagataggatgagttttacgttttttgcagacacaatagcacctgttggagagtct
gaaatagaaaaaagaaaaaaagaaattttaagagaattaaagttgaggaatttactaatg
cttgaaaagcatgatttgtctgagcttccaccaataaaaaagattgcggtaatttcttct
aaaacagcagctggatatgaggattttttaaaaaatttgaaagttgggtatctttaccaa
ccaatagttcatctttatgaatcacctatgcaaggtgctaatactgctgcgggaattatt
ttagcattggagagaataaaaagatccaacattgattataatgttgttgtaatagcaagg
ggtggtggtgcaaagagtgatttaatgtattttgacgatttagctcttggtgtagaaatt
gctaattttaataattattgtcctgttttatctggaattggtcatgaacgagattttaca
ataccggactacgttgcttggaaacgatttgcaactccaacggaagtagctagggcaatt
tctagacaaatagatgataatgtgagacaaatagatgataattggaatgatttgaagctt
ttaatgatgaatattttgaaaaatataagtactttgctaaatactcaattagttgattat
attaacaaaactctcaaagtaacttttttaggttatgaagatttatttgaaaattattat
gaaaatttaaaaaatcatttaaattatatttttgaattttcaagtagaaaaatatctgaa
gactttttgagttttatttctcagagaatggagggtaatttaaatgcaaaaaagggagaa
ttaataggttatgctaagttgatagaaaaagattttgcattgaaaatttcaaataaagaa
gcattgttaaatcaaatttttcaggaattgctgaaaaaagaagagcttgcgccgctattg
tttggtggtgcaattgttatgaaaggtagaaaaaagattagtagcgtaagaaaattgaga
atgggagaaaagattgaaatatacttgaaagatgggaagataaatgcaaaaatatctaat
gaaaaaaagaaaaagaaggaggaattatatggaggacatactctctttagaagttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (32)   

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