KEGG   Candidate division TM6 bacterium GW2011_GWF2_28_16: US01_C0001G0347
Entry
US01_C0001G0347   CDS       T04457                                 
Name
(GenBank) putative DEAD/DEAH box helicase domain protein
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
tmg  Candidate division TM6 bacterium GW2011_GWF2_28_16
Pathway
tmg03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tmg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    US01_C0001G0347
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tmg03019]
    US01_C0001G0347
Messenger RNA biogenesis [BR:tmg03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     US01_C0001G0347
SSDB
Motif
Pfam: DEAD Helicase_C ResIII UTP25 AAA_19 AAA_30 ERCC3_RAD25_C HEM4 ACT_5
Other DBs
NCBI-ProteinID: AKM81300
UniProt: A0A0G4B167
Position
complement(336220..337476)
AA seq 418 aa
MYHNSRSSSNFGGNRNSSSNFQNRGSGFGGRRSFGGNSGGNRSRGRKISSFDPSMFIQKA
SLQNEEMETVEKYQNKNAFADFAVDQQIKINLAHKGYQNPTPIQDQIIPHILEGRDVVGI
ANTGTGKTAAFLIPLIDKVLRNPATRVLVVTPTRELALQIRDELVSFSQNLPILSTLCIG
GSSISRQVERLQKRPAFVIGTPGRLKDLDQRHKLHFAHFDTIVLDEVDRMLDMGFIHDVK
AITSQLPEERQSLFFSATTNKKVEDIMQGFLRNPAFVTVESKESRAHIEQDVVRVGGKVK
IEVLHDLLIKEEFQKVLVFGRTKHGMERLSRELDQRGFRVASIHGNKTQGQRQKALQQFR
DDRVQILLATDVVSRGLDIRDVTHVINYDLPECYEDYIHRIGRTGRADKTGIALTFVD
NT seq 1257 nt   +upstreamnt  +downstreamnt
atgtatcataatagtcgctctagttctaattttggtggaaatagaaacagtagctccaat
tttcaaaataggggttctggttttggtggtcgtcgtagtttcggtggtaatagtggtgga
aatagaagtagaggcagaaaaatctctagttttgatccttccatgtttatccaaaaagct
agccttcagaatgaagaaatggaaactgttgaaaaatatcagaacaagaatgcttttgct
gactttgcagttgaccaacaaattaaaattaacttagctcataagggttatcaaaatcca
actccaattcaagatcaaattattcctcatatcttagaaggtagagacgtggttggcatt
gctaacaccggcacaggtaaaactgcagcctttttaattcctttaattgataaagttttg
agaaacccagctactagagttttagtcgtcactcctactcgtgaattagctttacaaatc
agagatgaattagtatcttttagtcaaaatttaccaattctttctactctttgtatcggt
ggttcttcaatttctagacaagttgaacgcttacaaaaaagaccagctttcgtcattgga
actccaggtcgtcttaaagatttagatcaaagacacaaattacattttgcccattttgat
actatcgttttagacgaagtcgacagaatgttggatatgggctttattcatgatgttaag
gccattactagtcagttgcctgaagaaagacagtctttgtttttctcagctaccactaat
aagaaggttgaagacattatgcaaggtttcttaagaaatcctgcttttgtgactgttgaa
tctaaagaaagtagagctcacatcgaacaagatgttgtcagagtgggcggaaaagtcaaa
attgaagttttacatgatttgttaattaaagaagaattccagaaagtcttagttttcggt
cgtaccaaacatggtatggagagattaagccgagaattagaccaaagaggcttcagagtt
gcttcaattcatggtaataaaactcagggtcaaagacaaaaagccctacaacaattccgc
gatgatcgtgtgcaaatccttttagcaactgatgttgtttcaagaggtttggacattaga
gacgtcactcacgtgattaattacgacttaccagaatgctacgaggattatatccaccgc
atcggtcgtactggtcgtgctgataaaactggaattgctttaacttttgttgattaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (32)   

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