KEGG   Tuber melanosporum: GSTUM_00003160001
Entry
GSTUM_00003160001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
tml  Tuber melanosporum
Pathway
tml03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:tml00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    GSTUM_00003160001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:tml03000]
    GSTUM_00003160001
   03021 Transcription machinery [BR:tml03021]
    GSTUM_00003160001
Transcription factors [BR:tml03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    GSTUM_00003160001
Transcription machinery [BR:tml03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     GSTUM_00003160001
  RNA polymerase III system
    TFIIIB
     GSTUM_00003160001
  RNA polymerase I system
    SL1/TIF-1B
     GSTUM_00003160001
SSDB
Motif
Pfam: TBP DUF4295 CBP_CCPA
Other DBs
NCBI-GeneID: 9184342
NCBI-ProteinID: XP_002836865
INRA: GSTUM_00003160001
UniProt: D5G963
AA seq 253 aa
MAAIISHPQNAQQAKAFTSPASLSFPGGAGDLTPPSDVESHKAQMNGQQVNDQSGGVVTP
ATPAATPGGGPTVSGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIR
EPKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIK
FPIRLEGLASRHHHFSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYIAF
ESIYPVLNDFRKV
NT seq 762 nt   +upstreamnt  +downstreamnt
atggcggctattatttcccacccccagaatgcccagcaagccaaggctttcactagcccc
gcttctttgtcttttcccggtggtgctggcgacttgactcctccatccgacgtggagagt
cataaagcccaaatgaacgggcagcaagtcaacgatcagtccggaggagttgttactccc
gcgaccccggctgcaaccccaggtggtggaccaaccgttagtggtattgtgcctacattg
caaaacatcgtcgcaaccgtcaatcttgattgtcgattggatctgaagacgattgccctg
catgctaggaacgcagaatacaaccccaagcgtttcgccgctgttatcatgcgtattcgc
gaacctaaaaccactgcactcattttcgcatccggcaagatggttgtcaccggtgccaaa
tctgaagatgattccaagctcgcctcgcgcaaatacgctcgcatcatccaaaaacttggg
ttcaatgctaaattcacggattttaagatccagaacattgttggctcctgtgatatcaag
ttccccattcgcctcgagggtctcgcctctcgccatcatcacttcagctcttatgagcct
gaattgttcccggggttgatctacagaatgattaagcctaagattgttctgcttatcttt
gtgagcgggaaaattgttttgacgggtgcgaaagttcgcgaggagatatacattgccttc
gaatccatctaccctgtgctcaatgattttagaaaagtttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   INRA (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (28)   

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