KEGG   Tuber melanosporum: GSTUM_00007994001
Entry
GSTUM_00007994001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K14311  nuclear pore complex protein Nup188
Organism
tml  Tuber melanosporum
Pathway
tml03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:tml00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    GSTUM_00007994001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tml03019]
    GSTUM_00007994001
Messenger RNA biogenesis [BR:tml03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     GSTUM_00007994001
SSDB
Motif
Pfam: Nup188_C Nup188_N-subdom_III Nup188_N Nup188_SH3-like DUF630
Other DBs
NCBI-GeneID: 9183670
NCBI-ProteinID: XP_002839825
INRA: GSTUM_00007994001
UniProt: D5GHQ5
AA seq 1538 aa
MFLLFYKALEESTSAFVVAWFTLMKDTQFLTERNFRPFPDHPDIAGAYKYAAALSSIVSL
VALQYPRVEKFIQEEWATPVSSESSATPPANPGPPRGLDQVPDGSFYIKNPVGIKAITQC
FVETAHNSTASVPGFCWCLILYDLLSFVNERRQEMDEMDRAGQESRNPRVEFFENALAEL
FDGATERGTKALGKATADNALETIILMIEPTGGQPVGPRFWVEAEEDGRRMKNVIADLLR
RALHALPLSATVLGAVLLANEVQYKDLEGHQAFLREDSDTSDTITGWTGSPAVRFTKNEE
SRKFLRRAKNRFPYEPIIFLKVMKALATVNVGVTNYLMNMDTYTQILPQGFSDYDVDDED
SDVTRIQLTNDLVVFAPRRAGFFEEEYSSRGGIVIPAGTIGEMISTGGSRPVVAWQHEYN
AFPVLGRVLEQALIGDGSNSGPSYAAVGELGSGEAVTEIIGLLTILIACGNGSTPGELSP
ARILEEASDLVGRSRDVVSIIFDLLEAGLQVVANSSSAGKSTDFIVAAIQFVDALVPALP
GRVWPYLARSTIQERHGRGGAFYGILSAVEVVRGDYEFTINCLRLFEDLVEEAIKSSVVN
MGGSRSLTVASMAAPPITRSGVSTAVQRDILSAWTRVVVDVFESYYAWKYINEEQKLEIG
QRISRIFTRILSMVYGVDESSDLSSKITSVLAPSAEHIIMVFLSEGDTELPMEPIIRTIR
VGLETPESSFHLRSLNSWVEHVVSVIKFAEVCVRTRGYLGLPPSQLEKQLYNLTAPLAKL
YVIHDRYRAPVLGIFESLVAASGTTQSEPPSLLGHLGADCASHFTAVLGTLDKPFDDEHL
EARIWGFVSAVLSTKQQGLSILLLRGETLWQGGLNGRDKGSKRSLISVALDSLSEIDKIS
STKSLAMLEAVALAQNFLSLAMDDLGKHSKFLPAITRFVEAQTIEFLPADSKEILTEKAI
RVAVAAHIAQLLAIHLHSRRPSSRDGTFFRQLIPKLKYYFDQAATISGYRASLHVNLRKN
FEEKWPGLTLLKLRKTTLQRKSYGIDYFYDMSLAGKVLSFDPCWDSRADGYANEVEQANL
NLSLVDSQVVLLRAWKLLSMELCDFVSANRELEQPLVDVVERCLQANIETGLPPPIFKTI
VCERAEFAFVILRRLQQAMQGANGQFDRILELAWKAIYTSATEFRQALATADVGYYRSLI
RIIYLVLHANASKPNQTTESAYMVLDILNLVVAKGFKELASATHTHSEAANPEDIALVTA
ILQASLKLPGISIIHDSLATHMAENGTIRAATTLYSWSERLAMESRTTTTTRAANANAND
PIYGELSLLFLLELSTIPALANQLATEGILDQILTSSLTAHIARQSVNPAGSPRLYAIWT
RALLPLSLNLLVHIGPRIAREVHAFLSFFAPQLRATITAWKARTVVTLAAVNEAVSIAMV
LAVLGRIMGAGGGACLDGFDKAALVEEVEYLLSHKNYLKSLVAATNKEEEEMLRREEEAD
ANGNGNGGGGSVEGGLVVKVTTGLGVLQGLLAEDEGED
NT seq 4617 nt   +upstreamnt  +downstreamnt
atgtttctcctcttttataaggccctggaggagagcacttctgcatttgttgtagcatgg
tttactcttatgaaagatacccaatttcttacagaacgaaacttccgtcctttccccgat
catccggatattgctggtgcctataaatatgcagcagcactttcatccattgtttccctt
gttgcattacaataccccagagttgagaagttcattcaggaggaatgggcgaccccagtc
tcaagcgagtcctctgctacaccgcctgcaaatcctggacctccccgtggattggaccag
gttccagatggtagcttttacatcaagaatccagttggaattaaggccatcactcagtgt
ttcgttgagactgcacataattctacggccagcgttcccggtttctgttggtgcctaata
ctctacgacctcctctcgtttgtcaatgagcgacggcaagaaatggacgagatggaccga
gccggccaggagagtaggaatccgagggttgagtttttcgagaatgctcttgctgagctg
tttgacggggccactgagcggggaacaaaggctcttgggaaggcaacggccgataatgct
ctggaaacgattattctcatgatcgagcctaccgggggacaacccgttgggccgaggttc
tgggtggaggcggaggaagatggccgcaggatgaagaatgtgatcgcagatcttctcaga
agggctctccatgctctcccactttctgcgacggtgctgggagctgttctcttggccaac
gaggtccaatacaaagatttggagggccaccaagctttcctcagggaggattccgacact
agtgacacgattacaggatggactggtagccctgccgtgagatttacaaagaatgaggaa
tcgcgaaagttcctacgacgagctaaaaaccgatttccatatgaaccgattattttcttg
aaggtcatgaaggctttggcaactgtgaacgtgggtgtcacaaattatctgatgaacatg
gatacctatactcagattctcccacaaggatttagcgactacgatgttgacgatgaagac
tcggatgtcactcggattcaattgaccaatgatttggttgtttttgcgccgcggagggct
ggcttctttgaggaggaatacagttctaggggaggtattgtgatacctgctggcacaata
ggagagatgatctcaacgggaggtagtcgtcctgttgttgcctggcaacatgaatacaac
gctttcccagtacttgggagagtacttgagcaagcattgattggcgatggctcgaactct
ggacctagctatgcagcggtaggagagctaggcagtggcgaagcggttacggaaatcata
gggcttctcactattctcatcgcttgtggcaacgggagcaccccgggagagttatcccct
gcccgaatactcgaggaggcgagcgatctcgtcggccgaagcagggatgtagtttccatc
attttcgatctcctcgaggcaggactacaagtagtggcaaactcttcaagcgccggcaaa
tcgactgatttcattgtcgctgcgatacaattcgtggatgctttggttccagctcttcct
ggccgggtgtggccataccttgctcggagtaccatacaggagcggcatggtcgtggtggg
gctttttatgggattttgtctgctgtggaggttgtgagaggcgattacgagtttacgatt
aattgccttaggctgtttgaggaccttgtcgaggaagctatcaagagtagtgtagtcaac
atgggtggtagtaggagtttgactgtggcctctatggccgctccaccaattactcgttct
ggtgtgagcactgcggtacagagagatattctgtcggcttggaccagagttgttgtagat
gtgtttgagagctattatgcttggaagtatattaatgaggagcagaagctagagattgga
caacgcatctcgagaatattcactagaatcctctcgatggtctatggggttgatgaatcc
tcggatttgagctcgaagatcaccagcgttttggctcctagcgctgagcacattattatg
gtatttttgtcggaaggtgatactgagctccctatggaacccatcatccgcacaatacgt
gttggtcttgagacaccggaatcaagttttcatctgagatctttgaattcttgggtagag
catgtagtttcggtgataaaatttgctgaggtttgcgttcgaacgcgtgggtatttgggg
ttaccgccttcgcagctagagaaacaattgtacaatctcactgcgcctttggctaaatta
tatgtgatccatgacagataccgggcgcctgttttggggatctttgaaagtcttgttgcg
gcgtccggaacaactcaatccgaaccaccctcattgctaggacatctcggtgccgattgt
gccagccattttacggctgtcctcgggactctggacaagccttttgacgatgagcatctg
gaagcacgtatatggggctttgtgtctgctgttttgagcactaaacaacagggcttgtcg
atattgctcctccgtggtgagacgttatggcaaggtggtctgaatgggcgtgataagggg
tcaaaaaggtcgttaatctcggtagcgctggactcactgtcagagatcgacaagatatct
tccacaaagtcattggcaatgctagaagccgtggctctggcccagaatttcttgagcctt
gctatggatgatttgggaaaacactccaagttccttcctgcgattactagatttgtggag
gcgcagacaattgagttcctacccgccgactctaaggaaatattgacagaaaaggcgatt
agggtagcggtggcagctcacattgcacaacttttggctatccacttacactcccggaga
ccatcttcacgtgatgggacgttctttaggcaacttattcctaagttaaagtactacttt
gaccaggcggctaccatcagcggatatagagcttcgctacacgtaaatctgcgcaagaat
ttcgaagagaaatggcccggcctaacactactaaaactgagaaagaccactcttcagcga
aaaagctacggtatcgactacttctacgacatgagcctggccggaaaagtcctatctttt
gatccctgctgggacagcagagcagacggatacgccaacgaagtagagcaggcgaatcta
aacctctcactcgttgattcccaagtggtcctcctccgcgcgtggaaactcctctcaatg
gagctttgcgactttgtctcggccaacagagaactcgagcagccgttagttgatgtggta
gagaggtgcctgcaagcaaacatagaaaccggcctgcccccgccaatcttcaagacgata
gtctgcgagcgtgcggaattcgcattcgtaattctccgccgcttacagcaggccatgcaa
ggtgccaacgggcaatttgacaggattttggaactagcctggaaagctatatacacttct
gccaccgaattccgacaggcactggccactgcagacgtggggtactacaggtccttaata
aggataatctatcttgtcctgcatgcgaacgccagcaagccgaaccagaccacggaaagc
gcatacatggtcctggacattctaaatttggtcgtagcaaagggcttcaaagagctagct
agcgcaacgcacactcactcggaagccgcgaacccggaggacatagcactggtgacagca
atcctgcaagcctccctaaaactgcccggaatctcgataatccatgacagcctcgcaacg
cacatggcagagaacgggacaatccgcgcagcgacaaccctctactcctggtccgagcgt
cttgccatggaaagcaggacgacgacaacgacgcgcgcggcgaacgcgaacgccaacgac
ccaatatacggcgaactcagcctcctcttcctcttggaactctccacaatacccgcgtta
gcgaaccaactcgcgactgagggaatcctagaccaaatcttaacctcctccctcaccgcg
cacatcgcccgtcagagcgtgaacccggccggttcaccgcgactctacgccatctggacg
cgcgcgctactcccactctccctgaacctgcttgtgcacatcgggccgcggatcgcgcgg
gaagtgcacgcattcctctccttcttcgctccgcagttgcgcgccacgatcaccgcatgg
aaggcccgcaccgttgtcacgctcgcggctgttaacgaggcagttagcattgctatggtg
ctcgctgtgctcggccggattatgggggcgggcggtggggcttgccttgacggctttgac
aaagcggcattggtggaggaagtcgagtacttgctttcccataagaattacttgaagagt
ttggtggccgccacgaacaaggaggaggaggagatgttgaggagggaagaggaggcggat
gcgaatgggaatgggaacgggggaggaggaagtgtggagggggggttggtggtgaaggtt
acgaccggtttgggggttttgcaggggctgctggctgaggatgagggagaggactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   INRA (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (36)   

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