KEGG   Tuber melanosporum: GSTUM_00011242001
Entry
GSTUM_00011242001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K14530  ribonucleases P/MRP protein subunit RPP40 [EC:3.1.26.5]
Organism
tml  Tuber melanosporum
Pathway
tml03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:tml00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    GSTUM_00011242001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tml03009]
    GSTUM_00011242001
   03016 Transfer RNA biogenesis [BR:tml03016]
    GSTUM_00011242001
   03029 Mitochondrial biogenesis [BR:tml03029]
    GSTUM_00011242001
Enzymes [BR:tml01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.5  ribonuclease P
     GSTUM_00011242001
Ribosome biogenesis [BR:tml03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    RNase MRP
     GSTUM_00011242001
Transfer RNA biogenesis [BR:tml03016]
 Eukaryotic type
  5'processing factors
   Ribonucrease P
    GSTUM_00011242001
Mitochondrial biogenesis [BR:tml03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   RNase MRP
    GSTUM_00011242001
SSDB
Motif
Pfam: Ribonuc_P_40
Other DBs
NCBI-GeneID: 9182233
NCBI-ProteinID: XP_002841842
INRA: GSTUM_00011242001
UniProt: D5GNE0
AA seq 384 aa
MTPLPKCYISVHKPPEKTTLPHPFNHLVDLLLPTDLYQLISNDLESSPTLSKPLLCHRMS
IPLSAIVEAEFLTKYIKTGNVIMLSRGRIDIDNVFSLNDGILRLSLTKEAYEKTGLTGQP
TRFGNTGPRKKHNRHLVEINLRDPAMLHGKKGFDRVVWSFQNKLNMKVDFLFCDLDQQKN
PIDCPILAALGAAPRQVQVPEVTSSSPVKVPSFDPPPGSVPQGGGTSLGAEYNREVWRDW
AMHVYEWLALANWGPADRVIEGDNIDSYLSTYAVDQGEFEGEAGAGLTRVRFRGMIPAGW
ILGVWKAVEKLASSVSVGNRKGWFSLTVHGLENSSISWGKSAHGSMVGGENGYTLLSIPQ
KNESSAEYVEVLTFEVVGSQDEHS
NT seq 1155 nt   +upstreamnt  +downstreamnt
atgacaccattaccaaaatgctatatatctgtgcacaaaccaccagagaagaccacctta
ccacatcctttcaatcaccttgttgacctcttacttcctaccgatctttaccaacttata
tctaacgacttggaatcgtcacccacgctatctaaaccgctactatgtcatcgaatgtcg
atacctctatcggcgatagtagaggctgaatttcttacgaagtatataaagacaggcaat
gttataatgctctctagaggccgaatcgacattgacaatgtcttctcgcttaacgacggg
atacttcgcctttcactcacgaaagaagcatacgaaaaaacgggcttaactgggcagccc
acacgcttcgggaatacaggccctagaaaaaagcataaccgacatctggttgaaataaac
ctccgtgacccagctatgctccatggaaagaaaggctttgaccgcgtagtctggagtttc
cagaataaactcaatatgaaagtcgatttcttgttttgcgatttagaccaacagaaaaat
cctatagattgcccaatactcgcagcgttgggagctgctccccgacaggttcaagtcccg
gaggtaacttcgtcaagcccggttaaagtgccttctttcgatcctccgcccgggtcggtg
ccacagggcggggggacaagtctcggggcggaatataatcgggaggtatggagggattgg
gcgatgcatgtctatgagtggctagcgctggcgaattggggtcctgccgatcgggtcatt
gaaggcgataatattgactcctatctatccacttatgccgtcgatcagggcgagtttgaa
ggagaggcaggtgcaggtctaaccagggtacggtttcgggggatgatcccggcgggttgg
attctgggcgtttggaaggctgttgagaaactggcatcgtctgtttctgttgggaatagg
aagggatggttttcattgactgttcatgggcttgagaattcatcgataagttggggtaaa
tctgcccatggctcaatggtgggtggcgagaatggatacacccttcttagcataccacag
aaaaacgagagtagtgcagaatatgtggaagtattaacttttgaagtcgttgggagtcaa
gatgagcattcatga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   INRA (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (26)   

Download RDF
DBGET integrated database retrieval system