KEGG   Thermotoga maritima MSB8: Tmari_1364
Entry
Tmari_1364        CDS       T02663                                 
Name
(GenBank) Protein RtcB
  KO
K14415  tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
Organism
tmm  Thermotoga maritima MSB8
Brite
KEGG Orthology (KO) [BR:tmm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tmm03016]
    Tmari_1364
Enzymes [BR:tmm01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     Tmari_1364
Transfer RNA biogenesis [BR:tmm03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    Tmari_1364
 Prokaryotic type
   tRNA splicing ligases
    Tmari_1364
SSDB
Motif
Pfam: RtcB
Other DBs
NCBI-ProteinID: AGL50288
Position
complement(1374690..1376114)
AA seq 474 aa
MKIERLDKYIWKIPKEGDMKVDAIIFTDAESVNDPQFREAMKQLMNVATLPGIVKYALAM
PDIHWGYGFPIGGVAAFDVKEGIISPGGVGFDINCGVRLMKTDLTYEDVKDRMRSLVEAI
YEFVPAGVGSTGDIVLGKKGLRKVLVEGAEWAVKSGYGLEEDLERIEDGGKIHPADPSYV
SEEAFERGSDELGTLGAGNHFVEVQMVQEIYDEELAEFFGLEIGTITVMIHSGSRGFGHQ
VATDYIRLMRDNLKEHNKNLPDKQLINAPFEHPLGQAYYSAMNCAANYAFANREILGHLV
RKAFWKVFGRDTRVDLIYDVAHNIAKVEEYEVDGKRRKLVVHRKGATRSLGPGSEKVPSI
YREVGQPVIIPGDMGTASYLLVGTKKAEEKTFGSTAHGAGRVLGRSAALKKLDYREVLDE
LAEKNIVVMSKSKKTLVEEAPEVYKDVDRVVQIVHEIGISRKVARMIPLGVVKG
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgaagatagaaagactcgataaatacatctggaaaattccaaaagagggagatatgaag
gttgacgcgatcatattcacggacgccgagagtgtgaacgatcctcagttcagagaagcg
atgaaacagctcatgaacgtggccacgcttcccggcattgtgaaatacgccctcgccatg
ccggacatacactggggttacggctttccaataggaggagtcgccgctttcgatgtgaaa
gaaggaatcatttcgccgggtggtgtgggtttcgatataaactgtggagtacgcctgatg
aagacagatctcacctacgaagatgtgaaagatagaatgaggtctcttgtcgaagctata
tacgaattcgttcccgcgggtgttggttcaacgggagacatcgttctcggcaagaagggg
ctcaggaaagttctcgttgaaggtgcggagtgggctgtcaagtcagggtacggtcttgag
gaagatctggaaagaatcgaagacggtggaaagatacatccagcggatccctcgtacgta
tcggaggaagcgttcgagagaggaagtgacgagctcggaactctcggtgcgggaaaccac
ttcgtggaggttcaaatggttcaggaaatatacgacgaagaactcgctgaatttttcggt
ctggagatcggtaccatcacggtgatgattcactccggaagcagaggattcggacatcag
gttgcgaccgactacataaggctcatgagggataatctgaaggaacacaacaaaaatcta
cccgacaaacagcttataaacgctccgttcgaacatccacttggacaggcctattattct
gccatgaattgtgcagcgaactacgcgttcgcgaacagggagatcctcgggcatctcgtt
agaaaagctttctggaaagtgttcgggagagacacacgtgttgatctcatctacgacgtt
gctcacaacatcgcaaaagtggaagagtacgaagttgacggaaaaagaagaaaactggtc
gtccacagaaagggtgccacacgttctcttggtcccggaagcgaaaaggttccttcgatc
tacagagaagtgggacagcccgtcatcataccgggtgacatggggactgcttcctatctt
ctggtaggaacaaagaaagccgaagaaaagaccttcggttccaccgcacacggagcgggg
agagtccttggaaggtccgctgccctgaagaagctggattacagggaagttctcgatgaa
ctggcagaaaaaaatattgtcgtcatgagcaagagtaaaaagactctggttgaagaagct
cctgaagtttacaaagacgtggacagagtggtgcagatcgttcatgagataggtatttcg
agaaaagtagccaggatgattcctcttggtgttgtgaaggggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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