KEGG   Tistrella mobilis: TMO_a0357
Entry
TMO_a0357         CDS       T02128                                 
Symbol
hsdR
Name
(GenBank) type I restriction-modification system restriction subunit
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
tmo  Tistrella mobilis
Brite
KEGG Orthology (KO) [BR:tmo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tmo02048]
    TMO_a0357 (hsdR)
Enzymes [BR:tmo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     TMO_a0357 (hsdR)
Prokaryotic defense system [BR:tmo02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   TMO_a0357 (hsdR)
SSDB
Motif
Pfam: EcoR124_C SWI2_SNF2 ResIII HSDR_N DEAD PBP_GOBP
Other DBs
NCBI-ProteinID: AFK55760
UniProt: I3TSM2
Position
pTM1:393202..396231
AA seq 1009 aa
MATITPERDLEEALVSKLKDLKYEYRPDIRDRATLERNFREKFETLNRVRLTDAEFSRLM
DEIVTPDVFTAARTLRERNSFTRDDGTPLNYTLVNIKDWCKNSFEVVNQLRINTDNSHHR
YDVILLINGVPVVQIELKTLGISPRRAMEQIVEYKNDTGNGYTKTILCFLQLFIVSNRDR
TFYFANNNARHFAFNAEERFLPVYEFADVDNKKIVHLDSFADTFLVKCTLGQTISRYMVL
VASEQKLLMMRPYQVYAVKAIVDSIAQDCGNGYIWHTTGSGKTLTSFKASTLLKDNPDIE
KCLFVVDRKDLDRQTREEFNKFQEGCVEENTNTASLVRRLLSDDYTDKVIVCTIQKLGLA
LDENSKRNKQQKKDGKKSFKEQLEPLRDKRIAFIFDECHRSQFGENHKAIKEFFPRAQLF
GFTGTPIFDQNAAQQKIEDTQASMKTTEDLFQKRLHTYTITHAIEDGNVLRFHVDYYKPQ
GKTVPKPGEPLAKRAVIEAILSKHDAATGQRRFNALLATSSINDAIEYHALFKTMQAEKQ
AADPSFQPLNIACVFSPPAEGDPDVKQIQEDLPTEKEDNAVEPEKKKEALKAILADYNAN
YGTNHKIGEFDLYYQDVQKRIKDQQWPEADLRKAYPDVPHHKIDITIVVDMLLTGFDSKF
LNTLYVDKNLKHHGLIQAFSRTNRVLNATKPYGNILDFRQQQDAVDAAIALFSGEAAAER
AREIWLVDKAPVVIQKLETAVQKLDTFMKSQGLDCAPDAVPNLKGDAARAAFIEHFKEVQ
RLKTQLDQYTDLTPENAATIERILPRDNLVGFRGAYLETAQRLRAQQGKGADKPTQEADQ
LDFEFVLFASAVIDYDYIMGLIARYSEATPGKQKMSREELIGLIQSDAKFMDEREDIAAY
INTLKAGEGLSEKAIRDGYSRFKAEKNAAELASIADKHGLATEALQGFVDTILQRMVFDG
ERLTDLMEPLGLNWKARRVKELDLMADLVPVLLKRAGGREISGLSAYEQ
NT seq 3030 nt   +upstreamnt  +downstreamnt
atggcaacgatcacgcccgaacgcgatcttgaggaggctttggtctcaaagctaaaggac
ctcaagtatgaatatcgtcctgatatcagagatcgtgctacactagagcgaaacttccgt
gagaagttcgagaccctcaatcgcgtccgcctgaccgatgccgagttctcgcgcctcatg
gatgagatcgtcacgccggatgttttcacggcagcccgcaccctgcgcgagcgaaacagt
tttacccgcgatgacggcacgcccctaaactacacgctcgtcaacatcaaggactggtgc
aagaattcctttgaggtggtcaaccagctccgcatcaacacagacaacagccaccatcgc
tacgacgttattctcctgatcaacggcgtgccggtcgttcagattgaactgaagaccctt
ggcataagcccgcgtcgtgccatggagcagatcgtcgaatacaagaatgacaccgggaac
ggatataccaagacgatcctatgctttcttcagctcttcattgtcagcaaccgcgatcgc
acgttttattttgcgaacaacaatgcacggcatttcgcctttaatgccgaggagcgcttt
ctgccggtctacgagtttgccgatgtagacaacaaaaagattgtccatctcgatagcttc
gccgacactttcctcgtcaaatgtaccctcggccagacgatcagccgctacatggtgctg
gtggcaagtgagcagaagctcctgatgatgcggccgtatcaggtctacgcggtgaaggcg
attgtcgattccatcgcccaggactgcggcaacggttacatctggcacactacgggcagc
ggcaagacgctaacctccttcaaggcatcaacgctgctgaaggacaatcccgacatcgaa
aaatgcctcttcgtcgtggaccgcaaggacctcgatcggcagacgcgcgaggagttcaat
aagttccaggaaggttgcgtcgaggaaaacaccaacaccgcctctctcgtccggcgcctt
ctctctgatgactataccgacaaggtcatcgtctgcacgatccagaagcttggccttgcg
ctggacgaaaacagcaagcgtaacaagcagcagaaaaaagacggcaagaagagcttcaag
gaacagcttgagccccttcgcgacaagcgtatcgcctttatcttcgacgaatgccatcgc
tcacagttcggcgagaatcataaggccatcaaggagttcttcccgcgggcgcagctcttc
ggcttcaccggaacgcccatctttgatcagaacgctgctcagcagaaaatcgaggacacc
caggccagcatgaagacgacggaagacctcttccagaagcgtcttcacacctacacgatc
acgcatgcgatcgaggacggaaacgtccttcgcttccacgtcgactattacaagccgcag
ggcaagaccgtgcccaagccgggcgaaccgctggccaagcgggcggtcatcgaggcgatc
ctgtccaagcacgatgcggccaccggtcagcgccggttcaacgccctgctcgccacgtcg
tcgatcaatgacgccatcgaatatcacgcgctgttcaaaaccatgcaggccgagaagcaa
gctgccgatcccagcttccagccgctgaacatcgcctgcgtcttctctccgcctgccgag
ggcgatcctgacgtaaagcagattcaggaggacctgccgacggagaaggaagacaacgcg
gttgagccagagaaaaagaaggaggccctgaaagccatcctcgcggactacaacgccaac
tacggtacaaaccacaagatcggcgagttcgacctgtattatcaggacgtgcagaagcgc
atcaaagaccagcaatggcccgaagctgacctacggaaagcctatcccgatgtgccgcac
cacaagatcgacatcacgattgtcgtcgacatgttgctgaccggcttcgactccaagttc
ctgaacacgctctacgtcgacaagaacctcaagcatcacggcctgatccaggccttctcg
cggaccaaccgcgtgctgaacgccaccaagccctatggcaacatcctcgacttccgccaa
cagcaggatgcggtcgatgccgctatcgcccttttctccggcgaggcggccgccgaaagg
gctcgcgaaatctggctggtcgacaaggcgcccgtggttatccagaagctggaaaccgcc
gtccagaagctcgacaccttcatgaagtcgcagggcctggactgcgcccccgacgccgtg
cccaatctcaagggcgatgccgcccgcgcggccttcatcgagcatttcaaggaggtccag
cggcttaagacccagctggatcaatacaccgacttgacccccgaaaacgccgcaacgatc
gaacgcatcctgccgcgcgacaacctcgttggcttccgcggggcctatctggaaaccgca
cagcgccttcgcgcccagcagggcaagggcgcggacaagccgacacaggaagccgaccag
cttgatttcgagttcgtcctcttcgcctcggccgtgatcgactacgactacatcatgggc
ctgatcgcccgctattccgaggcgacccctggcaagcagaagatgagccgcgaggaactg
atcggcctgatccagtccgacgccaagttcatggacgagcgtgaggatatcgcggcctat
atcaacaccctaaaggcgggcgagggactcagcgaaaaggccatccgcgacggctacagc
cgcttcaaggcggaaaagaacgcggcggagctggcgagcatcgcggacaagcacggacta
gcgaccgaggcgctgcaaggctttgtcgacaccatcctgcaacgcatggtctttgatggc
gagcggctcaccgacctgatggaaccccttggcctaaactggaaggcgcggcgggtcaaa
gagttggacctgatggccgacctggtgccggtgctgttgaagcgcgctggcgggcgcgag
atttcagggctgagcgcttatgagcagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (30)   

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