KEGG   Tistrella mobilis: TMO_c0441
Entry
TMO_c0441         CDS       T02128                                 
Symbol
sbcC
Name
(GenBank) exonuclease SbcC
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
tmo  Tistrella mobilis
Brite
KEGG Orthology (KO) [BR:tmo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tmo03400]
    TMO_c0441 (sbcC)
DNA repair and recombination proteins [BR:tmo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     TMO_c0441 (sbcC)
    Archaeal homologous recombinant proteins
     TMO_c0441 (sbcC)
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B SMC_N AAA_29 ABC_tran AAA_21 AAA_22 nSTAND3 NTPase_1
Other DBs
NCBI-ProteinID: AFK57051
UniProt: I3TWB3
Position
pTM3:480060..483848
AA seq 1262 aa
MRLLRIRGRNLASLQDDFIIDFEAPPLAHAGILAITGPTGAGKSTLLDAVCLALYDALPR
TAGAGARGETRDLALNDGRRILSHGAGEAEAEIDFIGRDGRRYRAGWSVRRARGRATGTL
QAAKRVLIDLEAGQVVADGKRDVGIEIAARIGLDFDQFRRSVLLAQGDFDAFLRADARDR
ADLLEKITGTGIYGRLSRAAFERNKAAQAEIERIRLQLGEHQPLDDAARAEAQAAAEAAR
HALAAARARQEAAAETLRRIDRRLSLEAARTAAAEALEAARLANDAASPDRDRLARNRQA
LAARAELAAADAATAGLARTRERLGAATGALARAEADHEAARTARTEAEAAVGRCRDEDA
ARAPHLAEARRLDEQLGAAARALAQARRDAEAAADIATGHQAASDRLAAVIAAAEARETA
ALARLAALAAAAPPVADPEAAAETILERAPLGDELRRLTVGLDDLQARDRADAAEADRLA
AARDDAARRMTGLAEAITAAEAEADQAEARALRRRRDRLVEIGHHLDDLSEVMVAALEAT
RARDAHAATAEDAMQAAAAATAEAERHRAALPVVEAKLEEAGRAADLSSAAAEEHAGRLR
ALLIPGAPCPVCGSTDHPTRAIDDLLARRLDTDRARLADLKAELGALTTALARAEERARA
ETRRAADAATAREDSAETLAAATADHEALLTRLADEAAEAGLDALPPLPAAEAAHETTDH
RPPAARLAGWREAVTDAIEAAEVRITTIDAAAARAASLRRDHTAATRDRDAAAEALARLA
ARRAEAGAAIARGEQRRTDLAARIARLDERLATLLDAACPDWRNSLAADAAGFAALIRRR
AAELAEAQSTAEAARAERIRLAPDHAAARVRAETAADAASHATTLAEECARSHAALQDAR
TMLLDGRSVAAVEAGAEAARNTARMALDAALTRLTEAATARARAMEARHQAEVAVTAAAE
TSTAADAALETARAALDMDPDTLRAVITAGAPALDAEARRLDALARSLAEAEATLRARQE
DLARHLADPDTIASGADTALREVAEAAHAEAATSCTAAEAACRKAEQRLAEDDSRRLAAG
RLAAALADARAAADVWAQLNELIGAADGTKFRRFAQSLTLDRLVAGANRHLGELHPRYAL
RRMEGAEMALEVVDHDMADEARAVHNLSGGERFLVSLALALGLADISAGRGLAIESLFID
EGFGALDPDALAMAISMLERLQATGRRVAVISHVEALKDRIPVQIRVTPRGAGRSGVEVV
SG
NT seq 3789 nt   +upstreamnt  +downstreamnt
atgcgcctgctccggatccgcggccgcaacctcgccagccttcaggacgatttcatcatc
gatttcgaggccccaccgctcgcccatgccggcatcctcgcgatcaccggcccgaccggc
gccggcaagtcgaccctgctcgatgccgtctgcctggcgctctacgatgccctgccgcgc
accgccggcgctggtgcccgcggtgagacccgcgacctcgccctcaatgacggccgccgg
atcctcagccatggcgcgggtgaggccgaggccgaaatcgatttcatcggccgcgacggc
cgccgctaccgggcgggctggagcgtgcgtcgcgcccggggcagggccaccggtacgctg
caggcggcaaagcgggtgctgatcgatctggaggccggccaggtggtcgccgacggcaag
cgcgatgtcggtatcgaaatcgcggcccggatcgggctcgatttcgaccagttccgccgg
tcggtcctgctcgcccagggcgatttcgacgcctttctgcgcgccgatgcccgcgaccgc
gccgatctgctggagaagatcaccggcaccggcatctatggccggctgtcgcgtgcagcc
ttcgagcgcaacaaggccgcccaggccgagatcgagcgcatccgtcttcagcttggggag
caccagccgctcgacgacgcagcccgggccgaggcccaggccgccgcggaggcggcgcgt
catgccctcgccgccgcccgtgcccggcaggaggccgccgccgaaaccctgcgccgcatc
gatcgccgcctgtcgctggaggcggcccggaccgccgcggcagaagccctggaagccgcc
cgccttgccaatgacgccgcctcccccgaccgcgaccggctggcccgcaaccgccaggcc
ctggccgctcgggccgaactggcggcggcggatgccgccaccgccgggctggcccggacc
cgcgagcggcttggcgcggccaccggcgcccttgcccgggccgaggccgatcacgaagcc
gcacgcactgcccggaccgaggccgaagccgccgtcggccgctgccgggacgaagacgcc
gcccgcgccccgcatctggccgaggcgcgacggctggacgaacagcttggtgccgccgcc
cgggccctcgcccaggcccgccgcgacgccgaagcggccgccgacatcgccaccggccat
caggccgcctccgaccggctggccgccgtcatcgctgccgccgaggcccgtgagaccgcc
gccctggcccgactggcagcgctggcggcagccgccccgccggtcgccgatccggaggcc
gcggccgaaaccatcctggagcgtgcgcccctcggtgacgaactgcgtcggctgaccgtc
gggctcgacgatcttcaggcgcgcgaccgcgccgatgccgcagaggccgaccgcctcgcc
gccgcccgcgacgatgccgcccgccgcatgaccggccttgccgaggcgatcaccgccgcc
gaggccgaggccgaccaggcggaggcacgggcactgcgccgccgccgcgaccggctggtc
gagatcggccatcacctcgacgacctctccgaggtgatggttgcagcgcttgaggccacg
cgcgcccgcgacgcccatgccgccacggccgaagacgcgatgcaggctgctgcagccgca
actgccgaggccgaacgccaccgcgccgccctgccggtggtcgaagcgaagctcgaagag
gccggccgcgccgccgacctgtcatcggccgcggccgaggaacatgccggccggctgcgt
gctctgctgatcccgggtgcgccctgcccggtctgcggttcgaccgatcatccgacccgt
gcgatcgacgacctgctcgcccgacggctcgacaccgaccgcgcccggctggccgatctc
aaggccgagcttggcgccctcaccaccgccctcgcccgggcggaagaacgggcgcgcgcc
gaaacccgccgcgctgccgacgcagccaccgcccgtgaggactcggcggaaaccctcgcc
gctgcgacggccgaccacgaggcactgctcacccggctggcagatgaagcggccgaggcc
gggctcgatgccctgccgcccctgcccgccgccgaagccgctcacgaaacgaccgaccat
cggccgccggctgcccgcctcgccggctggcgcgaggccgtcaccgatgcaatcgaggcg
gccgaggttcggatcacgacgatcgacgccgccgccgcccgggccgccagcctccgccgc
gaccacactgccgccacccgcgatcgggatgcggccgccgaagcgctcgcccgcctggcc
gcgcgccgggccgaagccggggccgcgatcgcccgcggcgagcagcgccgcaccgatctc
gccgcccgcatcgcccggctggacgagcggctggccaccctgctcgatgccgcctgtccc
gactggcggaacagcctcgccgccgacgccgcgggcttcgccgccctgatccgacgccgg
gccgccgaactggccgaagcgcagagcaccgccgaagccgcacgggccgagcgcattcgc
ctcgcccctgaccatgccgccgcccgggtccgcgccgaaaccgccgccgacgccgccagc
cacgccacgacacttgccgaggagtgcgcccgcagccatgcggcccttcaggacgcccgc
accatgctgctcgacggccggtcggtcgcggcggtcgaggccggggcagaggccgcccgc
aacaccgcgcgcatggccctcgatgccgccctcacccgcctcaccgaggctgcgaccgcc
cgcgcccgggcgatggaagcccgccatcaggcagaggtggcggtgactgccgcggcagaa
acatccaccgctgccgatgccgcgctcgagaccgcccgcgcggcgctcgacatggatccg
gacaccctgcgcgcggtgatcacggccggtgcaccggcgcttgatgccgaggcccggcgg
ctcgacgcgctcgcccgcagcctggccgaggccgaggcgacgctccgcgcccggcaggag
gatctggcccgccatctcgccgatccggacaccatcgcctcgggggccgacaccgccctg
cgagaggtcgcggaggccgcacatgccgaagcggccacatcctgcaccgcagcggaggcc
gcctgccgcaaggctgaacagcgcctcgccgaagacgacagccgccgcctggccgcaggc
cggcttgccgccgcactcgccgatgcccgggccgcggcggacgtctgggcgcagctgaac
gagctgatcggcgccgccgacggcacgaaattccgccgcttcgcccagtcgctcaccctc
gaccggctggtcgccggcgccaaccgccatctgggcgagctgcacccgcgctatgcgctg
cgtcgcatggagggcgctgagatggcgctggaggtggtcgaccacgacatggccgacgag
gcgcgcgcggtgcacaacctctcgggcggcgaacgcttcctggtcagcctggcgctggcc
ctgggcctcgccgatatttccgccggccgcgggctcgccatcgaaagcctgttcatcgac
gaaggcttcggcgcgctcgacccggacgcactcgccatggcgatctcgatgctcgaacgc
ctgcaggccaccggccgccgggtcgcggtgatcagccatgtcgaggcactgaaggaccgc
atcccggtccagatccgcgtcaccccccggggcgccgggcgctctggggtagaggtggtc
tcgggctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (53)   
   KEGG ORTHOLOGY (1)   
   RefGene (50)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (66)   

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