KEGG   Thermaerobacter marianensis: Tmar_0422
Entry
Tmar_0422         CDS       T01388                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
tmr  Thermaerobacter marianensis
Pathway
tmr03030  DNA replication
tmr03410  Base excision repair
tmr03420  Nucleotide excision repair
tmr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tmr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Tmar_0422
   03410 Base excision repair
    Tmar_0422
   03420 Nucleotide excision repair
    Tmar_0422
   03440 Homologous recombination
    Tmar_0422
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tmr03032]
    Tmar_0422
   03400 DNA repair and recombination proteins [BR:tmr03400]
    Tmar_0422
Enzymes [BR:tmr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Tmar_0422
DNA replication proteins [BR:tmr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     Tmar_0422
DNA repair and recombination proteins [BR:tmr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     Tmar_0422
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Tmar_0422
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc HHH_5 HHH_2
Other DBs
NCBI-ProteinID: ADU50543
UniProt: E6SGJ7
Position
494931..498113
AA seq 1060 aa
MCPSSARPDTKLVLIDGHSLMYRAFFALPPLATADGVPTNAVYGFLTMLLRLLEEVAPQY
IGVAFDRGLPAFRVERFPAYKGHRPEQPDELRPQFPLVKDVLAAMGVATVEHEGFEADDL
LGTLAHRARAAGVDRVLLVTGDRDVLQLVGDGVEVLLTRKGISDLQRYDEARIREEMGIA
PAQFLDVKALMGDPSDNIPGVPGIGEKTALKLIQQFGDLETVLARPEAAGGKKLPGLLRQ
YADQARLSRELARIRTDAPVEFDPERFARRPPDPAVLRPLLLRLEFRSLVDRLGLQAGRS
TAGTRASGETGPGDGQDPNREGQAVERGERHRRPAAPAPPVPAPEAAEAAGAGAEPEWPP
VDTLPDPAAVARWLEERVAGPQGGAVATREGPPADAVRGSRQGAGAGQPEAPPAEDGPAG
EPVTVVAVLAPAPSGPPSRAEAGDDPPTSATSGAAGGGPQLGGIGLAAAGRAAAWVAAGA
TGGGGATPGPDQSAGADHRTLAAALLRRSLAGFDLKPLYRWLLRSQEAEAGRPRSPAESA
GRGPGDAGAGGEAGAAPAAGGAALRPAPRATVLPAPASDLKLAAYLLDPVRNRYYLVDVA
RQFFGWELEEGPADRPDDPACRTTQLLGRDAALCARLRPAVEAELAARGLERVYREIELP
LVPVLAAMEEAGIAVDRRQLEELGRLFTRRSQELAEQIYQLAGETFNINSTQQLGQILFE
RLGLPVVKKTKTGYSTDAEVLETLAARHPIAELVLEYRSLVKLQGTYVDGLAEHIGPDGR
VHTTFQQTVAATGRLSSTQPNLQNIPIRDEPGRSLRRAFVAPPGHRLVAADYSQIELRVL
AHYSGDEGLLEAFARGQDVHARTASEIFGVPLEQVTPEQRRVAKAVNFGLAYGQTDYGLA
RALRIDRADARRFMDRYFERYPGVKRYMEETIRRARQHGEVTTLLGRRRPVPEIRHRVYH
IRQNAERVAINTPIQGTAADIMKLAMIRVYRALAGEGLRARIVLQVHDELLVEAPEDEVP
AVAALLRREMEGAFPLAVPLVVDVKAGTNWYEMEAVGAGA
NT seq 3183 nt   +upstreamnt  +downstreamnt
ttgtgcccatccagcgctcgccccgacaccaagctcgtcctgatcgacggacacagcctg
atgtatcgggcgtttttcgccctgcccccgctggcgacggcggacggcgtgcccaccaat
gccgtgtacgggttcctcaccatgctgctgcgcctgctcgaggaggtggcgccgcagtac
atcggcgtcgccttcgaccgcggcctgccggccttccgggtcgagcgcttcccggcgtac
aaggggcatcggcccgagcaaccggacgagttgcggccgcagttccccctggtcaaggac
gtcctggccgccatgggcgtggccaccgtcgagcacgagggcttcgaagccgacgatctg
ctgggcacgctggcgcaccgtgcccgggcggccggcgtcgaccgggtgttgctggtgacc
ggtgaccgggacgtgctgcagcttgtcggcgatggggtcgaggtgttgctgacccgcaag
ggcatcagcgatctgcagcggtacgacgaggcgcgcatccgcgaggaaatgggcatcgcc
ccggcccagttcctcgacgtcaaggccctgatgggcgacccctccgacaacatcccgggg
gtgccgggcatcggcgagaagaccgctctcaagctgatccagcagttcggcgacttggag
acggtgctggcccggccggaggccgcgggcggcaagaagctgcccggcctgctgcgccag
tatgccgaccaggcgcggctgagccgggagcttgcccggatccggaccgacgcccccgtc
gagttcgaccccgagcggtttgcccgccggccgcccgacccggcggtgctgcggcctctg
ctgctacgcctcgagttccgcagcctggtggaccggctggggctgcaggccgggcgatcc
acggcgggcacccgtgcctccggggagacgggcccaggggacgggcaggacccgaaccga
gagggccaggccgtggaacgcggcgagcgccaccgccgcccggctgccccggcgccgccg
gtccctgcgccggaggcggccgaggccgccggcgccggagccgagcccgagtggcctccg
gtggacacgttgccggacccggcagccgtagccaggtggctcgaggagcgggtcgctggc
ccgcaagggggggcggtcgccacgcgggaggggccaccggccgacgcggtccgcgggtcg
cggcagggcgcgggcgcggggcagcccgaagcgccgccggctgaggacgggccggcgggc
gagcccgtcaccgtggtcgcggtgctcgccccggcgccgtcgggaccgccgtcccgggcg
gaggcgggtgacgacccaccgacttccgcgacgtcaggggcggccggcggcgggccccaa
ttgggtggcatcgggctggcggcggccggtcgggcggcggcctgggtggccgccggcgcg
accggtgggggcggcgccacgccgggcccggaccagtcggccggtgcggaccaccggacc
ctggcggcagccctgctgcgccggtcgctggccgggttcgacctcaagccgctgtaccgg
tggctgctgcggtcgcaggaggcggaggccggccgcccgcggtcgccggcggagtctgcc
ggccgagggcccggcgacgccggggccggcggggaggcgggcgcggcgccggcagccggg
ggcgcggccctgcgtccggcaccgcgggcaacggtgctcccggcgcccgcctccgacctc
aagctggcggcgtacctgctggaccccgtccgcaaccggtactacctggtggacgtggcg
cgccagttcttcggatgggagctggaggagggccctgccgaccgtcccgacgatcccgcc
tgccgcacgacgcagctgctcgggcgcgacgccgccctgtgcgcccggctgcggcccgcg
gtggaggcggagctggccgcccggggtctggagcgggtctaccgggagatcgagctgccc
ctggtgcccgtgctggccgccatggaggaggccggcatcgccgtcgaccggcgccagctg
gaggagctgggccggctcttcacccggcgcagccaggagctggcggagcagatctaccag
ctggcgggggagacgttcaacatcaactccacccagcagctggggcagatcctcttcgag
cggctgggcctgcccgtggtgaagaagaccaagacgggctattccaccgacgcggaggtg
ctggagaccctggcggcccggcaccccatcgccgagctggtgctggagtaccggtccctg
gtcaagctccagggcacctacgtggacggcctggccgagcacatcggccccgacggccgg
gtgcacaccaccttccagcagacggtggccgccacgggccggctgtccagcacccagccc
aacctgcagaacatccccatccgggacgaacccggccgctccctgcgccgcgccttcgtc
gcgccgccggggcaccggctggtggccgccgactactcccagatcgagctgcgggtcctg
gcgcactacagcggcgacgaggggctgctggaggccttcgcccgcggccaggacgtccac
gcccggaccgccagcgagatcttcggcgtgcccctggagcaggtgacgcccgaacagcgc
cgggtggccaaagcggtgaacttcggcctggcgtacgggcagacggactacggcctggcc
cgcgccctgcgcatcgaccgggccgacgcccgccgcttcatggaccgctacttcgagcgc
taccccggcgtgaagcggtacatggaagagaccatccgccgcgcccgccagcacggcgag
gtgaccaccctgctggggcggcggcggcccgtgcccgagatccgccaccgggtgtaccac
atccggcagaacgcggagcgggtggccatcaacacgcccatccaggggacggccgccgac
atcatgaagctggccatgatccgggtctaccgcgccctggcgggcgaagggctccgggcc
cgcatcgtcctgcaggtccacgacgagctgctggtggaggcgccggaggacgaggtgccg
gcggtggccgccctgctgcggcgggagatggagggcgccttccccttggccgtgcccctg
gtggtcgacgtcaaggccggcaccaactggtacgagatggaggccgtcggcgccggtgcc
tga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (59)   
   KEGG ORTHOLOGY (1)   
   RefGene (56)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (75)   

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