KEGG   Tremella mesenterica: TREMEDRAFT_25866
Entry
TREMEDRAFT_25866  CDS       T03139                                 
Name
(RefSeq) hypothetical protein
  KO
K15322  tRNA-splicing endonuclease subunit Sen2 [EC:4.6.1.16]
Organism
tms  Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:tms00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tms03016]
    TREMEDRAFT_25866
Enzymes [BR:tms01000]
 4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.16  tRNA-intron lyase
     TREMEDRAFT_25866
Transfer RNA biogenesis [BR:tms03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing endonuclease complex
    TREMEDRAFT_25866
SSDB
Motif
Pfam: tRNA_int_endo tRNA_int_endo_N
Other DBs
NCBI-GeneID: 18491550
NCBI-ProteinID: XP_007000684
JGI: Treme1_25866
Position
Unknown
AA seq 450 aa
MLGGKSASNQKKYGTPLPVLLPSSPLLSPSRNTFLGSYIPSLLSRERIEIPQCVGVYDAT
TRSVWVTRRDHIDILFRRGFFGKGTLSRSEPTWRERRLGDLKSGDGLTAEQVREKRRIER
KQFKIDRAAAMLSAAKAAEAVLTSGQTPSLEAISEDGSSGGVDLTTLTPQTFLVRPTRPD
TNRNRGRKAFKRTPKPPLPADAPQPTPSSLAPINPGVEIVDLGPDEQQDEEDEEDLAEEL
VEDMEHLQLALEEAWFLASALGVLKIYDPLTNTYPPPSAILPLFLTPFSPGLHPVVPLPV
RPDDPFLVSYVAYHHFRSLGWVVKPGIKFACDWLLYRRGPAFSHSAFSCVVIPVYSDLEE
QAESPYGKEDWYVERCSWKWMNTIMRVNSLVQKTVILVYVTIPSTSAFPPSTQLSGGGLD
WRKINMSGILSRYTVREAALTRFSPARRRD
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgctaggcggcaaatcagcttccaatcagaagaaatacggtactcctctccctgtcctt
ctcccttcctctcctctcctctcaccaagccgcaacacattcctgggtagctacattcct
tcattgctatcaagagagagaatagagatacctcaatgtgtaggagtgtacgatgctacc
actcgatcagtttgggtcacgcggagagaccacatagatatattgttcagacgaggcttt
tttggaaaggggacattgagcaggagtgaacctacttggcgagagcggagattgggggat
ctgaagagtggggatggtttgacagccgaacaagtccgagagaaacgtcgtatagaaagg
aaacaattcaagattgatcgtgcagccgccatgctctctgctgccaaagcagcggaagct
gtcctcacttccggtcaaaccccttctttagaagctatatcagaggacggatcatcgggt
ggagtcgatctgaccactctcactcctcagacattcctcgtgagacctacaagaccagac
accaaccgaaatcgcgggcggaaagctttcaagaggacacccaaacctccccttccagct
gatgcacctcaacctactccatcctcattagctcctataaatccaggtgtggagattgtg
gacctaggtccggatgagcaacaggatgaagaggatgaagaagacttagctgaagagttg
gtagaggatatggaacatttgcagttggctctggaagaagcttggtttttagcttctgct
ttgggggtgttgaagatttatgatcctctcacgaacacttatcctcctccaagtgctata
ctccctcttttcctcacacccttctcgccaggtcttcaccccgtcgtccctctacctgtg
cgacccgatgatccctttttagtaagctatgtggcatatcatcacttccgctctcttgga
tgggtggtcaaaccaggcatcaaattcgcctgtgactggttattatatcgtcgaggtcct
gctttctcccattctgcattttcctgtgtcgtcatccctgtttattctgacctggaggaa
caagccgagtcgccttatggaaaggaagactggtatgtcgagagatgcagttggaagtgg
atgaacaccattatgcgcgtcaattcgctcgttcaaaagactgtgatactggtctacgtg
acaataccttccacctcagctttcccaccttccactcaactaagcggaggagggttagat
tggcggaagattaacatgtcaggtatcttatctcggtacactgtcagggaggccgctctc
acacgtttcagtcctgctcgacggagagattga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (29)   

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