KEGG   Tremella mesenterica: TREMEDRAFT_30693
Entry
TREMEDRAFT_30693  CDS       T03139                                 
Name
(RefSeq) hypothetical protein
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
tms  Tremella mesenterica
Pathway
tms03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:tms00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    TREMEDRAFT_30693
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tms03009]
    TREMEDRAFT_30693
Ribosome biogenesis [BR:tms03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    TREMEDRAFT_30693
SSDB
Motif
Pfam: Utp12
Other DBs
NCBI-GeneID: 18492138
NCBI-ProteinID: XP_007004451
JGI: Treme1_30693
Position
Unknown
AA seq 702 aa
MPSKQPVAGPSRPKLSTATQAPPPPSVSGFNSSRTQCAMALPVLGSADKVTVWDITNNRV
VSEWQVEGAAKVATLCWASTPSPTRRRKRKNKANESHVIDEEVLVIATQNEAVIFSPSRS
EVVQRLSLSTPVTAAWSDDRRVLLSTVSSLLVLSPDLSSISSTIPFSSGIASPTAVAILP
SSSRTTLHVLVANTSISCIHVDLESAQVTHTSSPLPASTSTVSSILPLPFSPVGYSFLVV
SEDDRIVSQYTLKTPTAPLKLSYRFASPILSPAHSVALSPTYLSVLHSSGEISVFPVPTE
LDLVRPKSDSNPSSVKVVEGKDERQARVCRLTFAPDSETPSTLLCGRLTGGGRVTWHRAV
LEHPEGGLKKLVTVKCEAQDLVNVNGSVNNIAPHRFAAPTGVVEAPPDDIEDETSARLPN
DVHVADLSLGERLLALPDAAAAPIVNGDAAPTKAISAPVGPVNASSLTRLLVQALHTSDP
ALLAMCLAHRNPTLVRNTIRKMPAQLALPLLKACVERLGQGKGANKRGGGRGVSQSEQQA
RGTVEWVKGVLVERGALLMTMPSLPIHLAALSQLLSARLQLYQPLLSLSGRLDLALTQIT
MRRLATQQGQGHIGGDANEAVRYVEGESDEDEIPIEASHDDEVENIGILMNGTANAQDDQ
ESDEEEEDDSDDDVLTSDSEDGRSEVVEGVEESDEEGLSEED
NT seq 2109 nt   +upstreamnt  +downstreamnt
atgccctccaaacaacccgtggccgggccatcccgccccaaactttccaccgccacccaa
gcacctcctccaccttcagtctccggtttcaactcctcccggacacaatgtgccatggct
ttgccagtccttggctcggccgacaaagtcaccgtttgggacatcacaaacaatcgtgtt
gtgtctgaatggcaagtcgagggtgctgccaaagtcgccacactctgttgggcatcaacg
cctagtcctaccagacggagaaagagaaagaacaaggccaatgaatctcatgtaatcgac
gaggaagttctcgtcatcgccacgcagaatgaagccgtcatcttctcacccagccggtcg
gaagttgtacagcgcttatctttgtcaacaccagtgactgctgcctggtccgacgatcgc
agagtcttattgtccacggtctcgtcactgctcgtgctgtcacctgacttgtcttccatc
tcctcaactatccctttttcatcaggtatcgcctctccgacagcagttgccattctgccc
tcttcctcccgtactaccctacatgtcctcgtcgccaacacttccatttcttgcattcat
gtagacctcgaatctgcccaagtcacacacacctcgtcacctctacctgcgtccacatct
accgtctcttccattctacctctccctttttcaccagtcgggtattcattcctcgtcgtg
tcagaggatgaccgaattgtctcccaatatactctcaagacgcccacagcgccgctgaaa
ctatcataccgctttgcctccccgatcctttcacctgctcactctgtagccctctcacct
acctatctatcggtgctgcactcttcgggcgagatttctgtctttcctgttcctactgaa
cttgacctcgttcgaccaaaatccgattccaacccttcttccgtcaaagtggtagaaggc
aaggatgaacgacaagctcgagtctgtcgtctcacgtttgctcccgactcggagacccca
agtacgctgctttgtggacggctgaccggtggcggccgtgtcacttggcatcgtgccgtc
ctcgaacacccggaaggggggttgaaaaaattggtcacggtcaaatgtgaagctcaagac
ctggtcaatgtcaatgggtcagtcaataatatcgcccctcatcgtttcgctgctcccacc
ggtgtggttgaagctcctcccgatgacatcgaagacgaaacctctgctcgattgccgaat
gatgtgcatgtagccgacttgtccctcggtgaacgtttgttagctcttccagacgctgcg
gctgcgcccatcgtcaatggggatgcggctccaaccaaggccatctctgctcctgtgggc
ccagtcaacgcttcttctttaactcgacttttagtccaagcgctgcacacttccgaccct
gcgctactggccatgtgtcttgctcatcgcaatccgacgctcgttaggaacacgatccgc
aaaatgcctgctcaattggctcttcccttgctcaaagcatgcgtcgagcggttggggcaa
ggaaagggtgccaacaaacgcggcggtggaaggggtgtctctcagtcggagcaacaggct
aggggtaccgtagagtgggtcaaaggtgtgctagtagaacggggagcattgttgatgact
atgccatctttacccatacacctggctgcgctctctcagcttctgtctgctcgtctgcag
ctgtaccagcctctcctctcattatcgggtcgactcgacctcgcgttgactcaaattacc
atgcgacgtctcgccactcagcaagggcagggacacatcggcggtgatgccaacgaggca
gtacggtacgttgaaggcgagagcgatgaggacgagattccgattgaagcaagccatgat
gacgaggtcgaaaacattgggatccttatgaatggcaccgcaaacgcgcaggatgatcaa
gaatccgatgaggaagaagaagatgatagcgacgacgatgtactcacgtcagattcagag
gacgggcgaagtgaagttgtcgaaggtgtggaggagagcgatgaggaaggtctatccgaa
gaggattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (23)   

Download RDF
DBGET integrated database retrieval system