KEGG   Tremella mesenterica: TREMEDRAFT_44456
Entry
TREMEDRAFT_44456  CDS       T03139                                 
Name
(RefSeq) hypothetical protein
  KO
K14570  RNA exonuclease [EC:3.1.-.-]
Organism
tms  Tremella mesenterica
Pathway
tms03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:tms00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    TREMEDRAFT_44456
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tms03009]
    TREMEDRAFT_44456
Ribosome biogenesis [BR:tms03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    TREMEDRAFT_44456
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-GeneID: 18493625
NCBI-ProteinID: XP_007005360
JGI: Treme1_44456
Position
Unknown
AA seq 619 aa
MSSPEWTTVLPKRKVISPINDPRSSPASAALDENGLDQDGFKKVLTKKEKGKLRKVERHK
PKFLFDQNGLRNGRKVGIVHIRDLVLYITADAQKPNWIFAQNHSYIQHTVILLVPGLLPE
HLGIPPSTALSSLPFPLVNPAYTEQGLPPSKVPMMDTIFMYGIPTRAPGDQRRLFSVFNT
LLNSPLPDHLRKQREKESRKRVEMAKVDGRTSLLYLMTPGQMADNDYPLPSYTNGSRVND
DQDGWVETPQAMSPPSDGRYPVLAVDCEMVVAGKEQVLARVSIVDVETDSVIFDELVKPP
CPVTDYRTQWSGITSAQLESATHTLSTIQEALISSDSPIITPHTILLGHSLECDLTALRL
RHALCIDTALIFTHPRGAPYKPGLKWLTQKWLDREIQGGTKGHDSVEDAKACVDLLKLKM
ANGPDFGSFMDTTESIFERIGRYRRHTEETPPTTAVCDNNVGPRHPGNKATTAVSCIGDD
DVVKAIGEQVKTHDFVFGRLLELSHVQGWNRDTSSEIPPSETVDEDSALSEALENFNNRL
NTLHSSLPPDTAFILMTGHSNPLPMLQLSEKRQKWERLVKSLGNIDDVPKDERWMLEDDR
ELESAVSQAREGMAFFCVK
NT seq 1860 nt   +upstreamnt  +downstreamnt
atgtcatctccagaatggacgacagtcctacctaaacgcaaagtcatctcacccataaac
gaccctcgttcctcccccgcctctgcagctcttgacgagaacggactggaccaggatggg
ttcaagaaggttttgacaaagaaggaaaaggggaaattgaggaaggtggagagacataag
ccaaagtttctttttgatcagaacggtttgaggaatggtagaaaagttggaattgtacac
atacgagatcttgtcctttacatcactgcagatgctcaaaaacccaactggatattcgcc
cagaaccattcttacattcaacatactgtcattcttctggtccctggtcttttacccgaa
caccttggtattccacctagcaccgcactttctagtttaccttttcctctcgtcaatccg
gcttacaccgaacagggtctacctcccagtaaagtcccaatgatggataccatattcatg
tatggtatccccactcgtgctcctggagatcaacgaagactgttctcagtgttcaatact
ttattaaacagtcctttgcctgatcatcttcgaaaacaacgagagaaagaatcacgaaaa
cgtgttgaaatggcaaaagtcgatgggaggacatcattactctacctcatgactcctggt
cagatggcggacaacgattatcccctaccctcgtatacaaacggcagtagggtgaatgat
gatcaagacggatgggtcgaaacgcctcaagcgatgagtcctccatccgatgggcgatat
ccagtcctggcggtggattgcgagatggtcgtagcgggcaaagaacaagttctcgcccgg
gtctccatcgttgatgtcgaaactgattctgtcatctttgacgagcttgtcaaacctccc
tgtcccgtgaccgattaccgtactcaatggtcaggaatcacctctgcacagctagaatcc
gcaactcatacactctccactatccaagaagccctcatatcctctgactcacccataatc
actccccacactatactcttgggtcattctttggaatgtgacctcaccgctctccgtcta
cgacacgcgctatgtatcgatactgcacttatattcacacatccacgtggagcaccttac
aagccagggctgaagtggttgacacagaaatggttagatcgggagattcaaggagggacg
aagggacatgattccgtcgaggatgccaaagcatgtgtcgatctgctgaagttgaagatg
gccaatggccctgactttggtagtttcatggacaccacagaaagtatctttgaaaggata
ggaagatatagacgtcatactgaggagacaccgcctacgacggcggtatgcgataataat
gtcggaccacgtcatccaggtaacaaggcaacaacagcggtcagttgcataggggatgat
gatgtcgtcaaagccataggagaacaagtgaagactcatgattttgtctttgggagatta
ttggagttgtcacatgttcaagggtggaaccgagatacgtcttcagaaattcccccgtca
gagaccgtcgatgaggattcggcactttcagaagctttagagaacttcaataatcgccta
aacacccttcactcttctctgccacccgataccgctttcattctcatgactggccactcc
aaccctttacctatgttgcaactatcagaaaagaggcaaaaatgggaacgactcgtcaaa
agtcttgggaatatcgatgatgttcccaaagacgaaagatggatgttggaagatgaccga
gagttggaaagtgctgtaagtcaagcaagggaagggatggcgttcttttgcgtcaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (24)   

Download RDF
DBGET integrated database retrieval system