KEGG   Tremella mesenterica: TREMEDRAFT_59052
Entry
TREMEDRAFT_59052  CDS       T03139                                 
Name
(RefSeq) hypothetical protein
  KO
K11644  paired amphipathic helix protein Sin3a
Organism
tms  Tremella mesenterica
Pathway
tms04139  Mitophagy - yeast
Brite
KEGG Orthology (KO) [BR:tms00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04139 Mitophagy - yeast
    TREMEDRAFT_59052
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tms03036]
    TREMEDRAFT_59052
Chromosome and associated proteins [BR:tms03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     TREMEDRAFT_59052
    REST complex
     TREMEDRAFT_59052
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    TREMEDRAFT_59052
SSDB
Motif
Pfam: Sin3a_C Sin3_corepress PAH
Other DBs
NCBI-GeneID: 18494532
NCBI-ProteinID: XP_007001493
JGI: Treme1_59052
Position
Unknown
AA seq 1241 aa
MSTPRSNPPPAADRIDYRPLNVRDALTYLDQVKNQFADHPDVYNRFLDIMKEFKGQIIDT
PGVIDRVSTLFRGHPALIQGFNTFLPPGYRIEASTADDDSGKITVTTPSGTVSQMPGALS
AAIHQRYREGIAVNRTSPSMHETAPPGPSQIVDPLPPLHSHLSSGPPPFQNTHNARGAPV
VPGLPPAQPSVTTRPLNNVQSAPGPLPLPPHTQPPSAPSGPSTPSAVQFLASGASGPGAA
AQAGQRGQMLEFNHAISFVNKIKNRFNQEHDTYKQFLEILQTYQRDTRDIVEVYEQVQKL
FINAPDLLTEFKQFLPENGQGGLLGLGNAALGGPAPPSAERPVPPKRASKENKDSSAQKK
RRTGPADVSKPTQKRSKHAAKVDSPSEDMDGSFPTNQPQTLASAEEVAFFDKVKKFIDDK
DMIDPKTLLDRAETFLGGSGDVWTNFKRMIGVDDTGNVPPTAGSAQGGYNFGGMLNIDQQ
VVENTPMLDRVKPDMSSSRAKTYGPSYRKLPKTVNLQCSGRDAMCWEVLNDEWVSHPTWA
AEDAAPFMAHKKNAYEEALHKSEEERHEYDYHIEANLRTIALLEPLKAKIDAMDAEEKAH
FNLKAGLGGQSKSIYQRIIKKVYGKELGPDIIKALHENPVTALPIVLDRLRAKDEEWKKA
QREWNRVWREQDARNFYKALDHQAAIFKANDKKLMAPKSLITEIETRRREQTNARAALLN
PSVDKARPQFEFLFDDVEVIKDIVKLIIIYLDRANSSSNHGDRTRVEMQIRRLIPHLFLL
NREEFEAELNDPESSTSDSDSDQSSEQEAEDDDGMDTTTLKSKKQADDLRKQLFKGVDKD
GREKSVTATPAPDDGVVNGIARSTEGTPMTDNERGDTPPPAAADPQAVAEAIKKDKVGAE
ASEQIWVQIETGDSSSQASSPHGSETYKTRVIRKANFFGNANFYVLVRLLQILYSRLKAC
KTYAEKAAMEQKATPNPVAVEMGLADPESTNFGVEAGENPARYFYGHLLSMAEKLFDAEI
DTNTFEETLRIMFQTQAYTMFTLDRLLGSIVKQAQTIIGDIKSQELFSLLERDREQERTS
TRQQIAYRMSAEGLLAADENLFRMEWLMGRDDLTVYDAETVTARWRQYVDSYVLTHPTEG
QPIRVSGPFLSKGFETTSEDVVSSQLEGRSGLELKLALGNLRMFFTPGTEDYYYRRRPDF
ENNKLDTKEIELESSHKAKLDQWVEKMYTGSEMQVEPAVVA
NT seq 3726 nt   +upstreamnt  +downstreamnt
atgtccactcccagatctaaccctcctcccgctgctgatcgtatcgactatcgtcctctt
aacgtacgggatgctctcacataccttgatcaggtcaagaaccagtttgccgaccatccc
gacgtctacaatcggttcctggatatcatgaaagaatttaaagggcaaataatcgacaca
ccaggggttattgaccgtgtttccactctgttcagaggacatccagctcttatacaaggc
ttcaacacttttttacccccaggatatcgtattgaagcttccaccgcagacgacgatagc
ggaaagatcacagtcaccacgccttccggtactgtcagtcagatgccaggagccttgtcc
gctgccatacaccaacggtatcgagagggaatcgcggtcaaccgcactagtccatccatg
cacgaaacagcacccccaggtccttcacagattgtggaccctctaccacctcttcattct
catctctcctccggacctcctcccttccaaaacacccataacgctagaggggcacctgtc
gtgccaggtctacccccagctcagccttcggtcactactagacctctcaacaacgtacaa
tcggcacccggacctttgcctcttccacctcacacccaaccgccttctgctccatcagga
ccgtctactccttctgccgtacagttcctcgcttcgggcgcgtccggccctggtgctgct
gctcaagctggacagagaggccagatgctcgagtttaaccatgcgatatcgttcgttaac
aagatcaaaaaccgtttcaaccaagagcatgacacgtacaagcagttcttggagattctg
cagacgtatcaacgtgacactcgcgacatagtggaggtctatgaacaagtgcagaaatta
ttcatcaatgccccagacctgctaaccgagttcaaacagttcttgccagagaacgggcag
gggggcttgttgggccttggaaacgctgcccttggaggacctgcgccccctagcgccgaa
cggccggttccaccaaagcgcgccagtaaggagaataaggattcgagcgctcaaaagaag
aggcgtaccggtccagcagacgtctcaaaacccactcaaaagcgctccaaacacgccgcc
aaggtcgacagtccctctgaggatatggatggtagcttcccaaccaaccaacctcagacc
ctcgcatcggctgaagaagtcgcgttttttgataaagttaaaaaattcatcgacgacaag
gatatgatcgaccccaagacactgctggaccgcgcggaaactttcctgggtggctccgga
gacgtctggaccaatttcaaacggatgataggtgtagacgacaccggcaacgtgcctccc
acagctgggtcagcgcaggggggttacaactttggtgggatgctgaatatcgaccaacag
gtggtggagaatacaccgatgctggacagagtcaagcccgacatgagtagctcgagagca
aaaacttacggaccaagttaccgcaagctgccaaaaacggttaacctccagtgctctggt
cgggatgccatgtgctgggaggtcttgaacgacgagtgggtatcacacccgacctgggcg
gcggaagatgcggctccattcatggcgcacaagaagaacgcttacgaggaagcccttcac
aagtccgaggaagagaggcacgagtatgactatcacattgaggcgaatctacgcaccatc
gcacttctcgaacccctcaaagcaaagatcgatgccatggatgcggaagagaaagcgcac
tttaacctcaaagccggtcttggtggacaaagcaagtccatctatcaacgaattatcaaa
aaggtgtatggaaaagaattgggacccgacatcatcaaggctttacatgaaaacccagtc
accgcccttcccatcgtgctagaccgtcttcgtgccaaggacgaggagtggaaaaaggct
caaagggagtggaatagggtctggcgtgaacaagatgcgaggaacttctacaaggcgctc
gatcaccaagccgccatcttcaaggcgaatgacaaaaagctaatggcaccaaaaagcctt
atcaccgagattgaaacccgtcgacgcgaacagaccaacgcgagagcagcactcctcaat
ccatccgttgacaaggctcgacctcagttcgaattcctcttcgacgatgttgaggtcatc
aaagacattgtcaagttgatcatcatctatctcgaccgagccaactcgagttccaatcat
ggcgacagaactcgagtcgagatgcagatccgacgtctcatacctcatctcttccttctc
aaccgggaggaatttgaagctgagctcaacgatcctgaatccagcacctcggattccgac
tcggaccaatcgtcagagcaagaagctgaagacgatgatgggatggacactactacgcta
aagtctaaaaagcaggcggatgaccttaggaagcaactcttcaaaggtgtggacaaagat
ggtcgagagaagagcgtgacggctacacccgcacccgatgatggtgttgtcaatgggata
gctcgatcgaccgagggtacccctatgaccgacaacgaaagaggtgacactcctccccca
gcagctgcggaccctcaagctgtagcggaggccatcaagaaggacaaggtgggtgcggag
gccagtgagcagatttgggtgcagattgagactggcgattcttcatctcaagcgtcgtcg
ccgcatggttcagagacatacaaaacgcgagtgatacgaaaggccaatttcttcggcaat
gccaacttttacgttcttgtccgcttgttacagattctgtactctcgtctcaaagcgtgc
aagacgtacgccgagaaagccgcgatggagcaaaaagctactcccaaccctgtcgctgtg
gaaatgggtcttgccgatcctgaatctacaaactttggagttgaagctggggagaacccc
gcacggtacttttacggtcatctccttagtatggctgaaaagttgtttgatgccgagatt
gacaccaacacattcgaggagactttgaggatcatgttccaaacgcaggcttatacgatg
ttcaccttggatcggttgttgggcagtattgtcaagcaggcacaaactatcataggtgat
atcaaaagtcaagaactctttagtctgctcgaacgtgaccgtgaacaagaacggacttcc
acgagacaacaaatcgcttatcgtatgtctgcagaaggtctgttggcagcggatgaaaat
ctctttcgtatggaatggctcatggggcgggatgacctgacggtctatgacgcggagact
gttacggcgaggtggagacaatatgttgatagttatgttctaactcatccgacggaaggt
caacctatccgtgtatccggaccattcttatccaagggtttcgaaacaacttccgaagac
gtagtgtcgagtcaactggaaggtcgatcagggttagaactcaagctcgctcttggtaat
ctcagaatgttcttcactcccggaactgaagattactattatcgacgtcgaccggatttt
gagaacaataaattggacactaaagaaatcgaacttgaatcgagtcataaagccaagttg
gatcaatgggtggagaaaatgtatactgggtctgagatgcaggttgagcctgcagtggtg
gcgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (43)   

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