KEGG   Tremella mesenterica: TREMEDRAFT_72276
Entry
TREMEDRAFT_72276  CDS       T03139                                 
Name
(RefSeq) hypothetical protein
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
tms  Tremella mesenterica
Pathway
tms03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:tms00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    TREMEDRAFT_72276
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tms03019]
    TREMEDRAFT_72276
   03009 Ribosome biogenesis [BR:tms03009]
    TREMEDRAFT_72276
   03036 Chromosome and associated proteins [BR:tms03036]
    TREMEDRAFT_72276
Enzymes [BR:tms01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     TREMEDRAFT_72276
Messenger RNA biogenesis [BR:tms03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     TREMEDRAFT_72276
Ribosome biogenesis [BR:tms03009]
 Eukaryotic type
  90S particles
   RNase
    TREMEDRAFT_72276
 Prokaryotic type
  rRNA processing factors
   TREMEDRAFT_72276
Chromosome and associated proteins [BR:tms03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     TREMEDRAFT_72276
SSDB
Motif
Pfam: Ribonuclease_3 Ribonucleas_3_3 dsrm
Other DBs
NCBI-GeneID: 18498712
NCBI-ProteinID: XP_007007211
JGI: Treme1_72276
Position
Unknown
AA seq 312 aa
MSSSILAGPASLALLKLPPLPTLPFPPLPKIQDVKLETLVFTHSGIAGKKKNSMSLEMDE
DAMEDNQKLEHVGDALLGTVITCLLHELFPKLRQGPATVLKAHLVNNTTLCQLSQRYELP
SRLICTSDQRYNLAQNEKTMADIFEAYVAGLFYSHLYRASTSFPRIPTPPATPRKRTLTP
DPKPPSASNAEARGQAMDHIHKWLAPLFTPLAHWVLDQMRLEQKRLEATLSATPEEDADA
VGATARLNEYFTAKEGNIPTYDSTQMNGMWKVECTAVKKDGTEYRAEAIRNSKKLASTVA
AYKIARQISLIP
NT seq 939 nt   +upstreamnt  +downstreamnt
atgtcgtcatcaatccttgccggtcctgccagtctggcactactcaagctacctcctttg
cctacccttccatttccccctctgccaaagattcaagatgtcaagctcgagacactcgtg
ttcactcattcggggattgctgggaagaaaaagaattccatgagtctggagatggacgaa
gatgcgatggaggataatcagaagctggagcatgtcggcgatgctcttcttggcactgtc
atcacctgtctactgcatgagcttttccctaagctgcggcaaggacctgcaactgtcttg
aaagctcaccttgtgaacaacaccacactctgtcagctttcccaacgctatgaacttcct
tcccgtcttatctgtacttcggatcaacgttacaacttggctcaaaacgagaaaaccatg
gcggatatctttgaagcctatgtagccggtctcttctactcacacctgtatcgagcttcc
acatcattcccccgcatccctactccacccgccactccccggaagcgaactctcacaccg
gatcccaaacctccatcagcttcaaacgccgaagcccgaggacaagccatggatcacata
cacaagtggcttgctccgctgttcacacccctggctcattgggtactggatcagatgcgt
ctggagcagaagcggttggaagcgacgttgtcagccactcctgaggaggatgcggatgct
gtgggtgccactgcgaggcttaacgaatatttcacagccaaggaagggaatatcccgacg
tatgactcgacacagatgaacggtatgtggaaagtggagtgtactgcggtcaagaaagat
ggcactgagtaccgagccgaagctatcagaaacagcaaaaagcttgcttcgaccgttgcg
gcgtacaaaattgctcggcaaatctctttgataccctag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (27)   

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