KEGG   Tremella mesenterica: TREMEDRAFT_72540
Entry
TREMEDRAFT_72540  CDS       T03139                                 
Name
(RefSeq) hypothetical protein
  KO
K11836  ubiquitin carboxyl-terminal hydrolase 5/13 [EC:3.4.19.12]
Organism
tms  Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:tms00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:tms01002]
    TREMEDRAFT_72540
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tms04121]
    TREMEDRAFT_72540
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tms04147]
    TREMEDRAFT_72540
Enzymes [BR:tms01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     TREMEDRAFT_72540
Peptidases and inhibitors [BR:tms01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   TREMEDRAFT_72540
Ubiquitin system [BR:tms04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    TREMEDRAFT_72540
Exosome [BR:tms04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   TREMEDRAFT_72540
SSDB
Motif
Pfam: UCH zf-UBP UBA zf-UBP_var UCH_1 HYPK_UBA CUE UBA_4
Other DBs
NCBI-GeneID: 18498759
NCBI-ProteinID: XP_007008353
JGI: Treme1_72540
UniProt: R7S951
Position
Unknown
AA seq 802 aa
MSCSHIKDISSSLRPPRGSEQVHREECTLCFDGQDDSEGVLVCLQCFNGGCFGEGRRHAF
LHFQRSKHPLGVVIKRTRKEPKKRNSLEPPLKKLAISAPSDEELYTYSTSLRCFSCSSVG
EVIHSDDPNVSSTVAGIMSALSSAQQSEVKAWEEEILPCEHTLTLHQEPVITSVPSQCSS
CELTSNLWLCLTCGLANCGRKQFGGVGGNGHALQHYKETGHMVGVKLGTITPEGTADIYC
YACDDARLDPDLATHLHTVGISVFGQTKTEKSMTELQLEHNLKFDFSMTGDDGKELEPMF
GKGLTGLKNLGNSCYMASVLQALFSLPAFRQRYYTETALAHFQTCDNPVPASCLECQMLK
LADGLISGRYSHLARQPSPSYSDLDTMNEPPKSQDGIKPSQFKALIGKGHEEFSTMRQQD
SEEFLQHLVTRLRAEAKRQGRSEALEATNVIKFGMEQRLECSQCRRVGYKVEAVDLASLP
VRATEKGVDAEGRKLWDRVQFTECIEDLCAVEELAEYACANCGTKGKAQKSLRFRTFPDL
LVFHMKKFQLVNWVPTKLEIPVDVPDRLKLDRYVGEGRQLGELDLDMDAPTAATPAFNAL
ALEQLEAMGFPTIRCQKALLATGNGDAEMAMTWLFEHMDDPDIDAPLANAGVSSVAGGPE
PSAEQIAMIAEMGFTSAQARKALRQSDGNAERAIEWLFSNPTDPGEEAPLSGSIPQTATA
PEDFGGSSRLPAEYKLKAFISHKGPSLHSGHYVATIRQPQAGLEEESEEEWVLFNDEKVV
KAPEKGGEEMRGLAYLYIYERI
NT seq 2409 nt   +upstreamnt  +downstreamnt
atgagctgctctcatatcaaagatatatcaagctctctgagacctccgcgaggatctgag
caggttcatcgagaagaatgcactctctgttttgatggccaggatgattcagagggtgtt
ctggtctgtttgcaatgcttcaatggaggttgtttcggtgaaggacgacgacacgccttt
ctccactttcagaggtccaagcaccctctcggtgtggtcatcaaacgtactcgcaaagaa
ccaaagaagaggaactccttagaaccacctttgaagaagcttgccatttcagcaccttct
gacgaagagctgtatacctatagcacatcacttcgttgcttctcttgctcctcagtcggc
gaagtgatacattccgatgatcccaatgtctcgtccacggtggccggtatcatgtcggct
ctgtcatcagctcaacaatccgaggtcaaagcttgggaagaggaaatcttgccttgcgag
catacccttactctgcatcaagagcccgtcatcacctcagtaccttcacagtgctcatcc
tgcgaattgacttctaatctgtggttatgtctcacatgtggcctggcgaattgcgggagg
aagcagttcggaggtgtgggtggcaacggacatgctttacagcactacaaggagactggt
catatggtcggtgtcaaactgggcaccattactcccgaaggcactgcggatatctattgc
tatgcgtgtgatgatgccagattggaccccgaccttgccacacatttgcacactgttggt
atctcggttttcggacaaacaaagacggagaaatcgatgacagagctccaactggaacac
aacctgaaatttgacttctccatgaccggtgatgatggcaaggagttggaaccaatgttt
ggtaagggcctgaccggtctgaagaaccttggaaacagttgttatatggcttcggtcttg
caagctctcttctcccttcctgccttccgccaacgttactataccgagaccgccctcgcc
cacttccaaacctgtgacaaccctgtgcccgcctcatgcctcgaatgccagatgctcaaa
ctcgccgatgggctcatctcgggtcgttactcccatcttgccaggcagccttcaccttct
tactccgaccttgacaccatgaacgaaccgccgaaatcccaggacggaatcaaacctagt
caattcaaagcgttgatcggcaagggacacgaggagttctcgaccatgcgacaacaagac
tctgaagagttcctgcagcaccttgtgacgcgtctgcgagcagaggccaagcggcaaggg
aggagtgaggcattggaagccaccaacgtcataaaatttgggatggagcaaaggctggaa
tgttcccaatgcaggcgggtggggtacaaggttgaagctgtcgacttggcatcgttgcct
gtacgagcgacggagaagggcgtcgatgcagagggaagaaagctgtgggacagggttcag
ttcactgaatgcatcgaggatttgtgtgcggtagaagaattagcggaatacgcttgtgcg
aactgcggtacgaaggggaaggcacagaagtcgctacggttcagaacgttccccgatctg
ctggtatttcatatgaagaaatttcagttggtcaattgggtgcctaccaaactggaaatc
cctgtggatgtgccagaccgactaaaattagaccgatatgtgggtgaaggtcgtcagcta
ggagaactagatcttgatatggacgctcctacggctgctactcctgcgttcaatgccctt
gcgcttgagcagctcgaggcgatgggtttccctacaattcggtgtcagaaggcgttgttg
gctacggggaacggagatgccgagatggcgatgacatggttgtttgagcatatggacgat
cctgacattgacgcacctcttgccaacgcaggggtctcgtccgttgcaggcggaccggaa
ccttcagctgagcaaatcgccatgatcgccgaaatgggcttcacatctgctcaagctcgc
aaggccctacgtcagagcgatggtaatgctgagcgagccatcgaatggctcttctccaac
cccacggatcctggtgaagaagcccccctctccggatccatcccccaaacggcgactgct
ccagaggactttggcggatccagtcgactccccgcagaatacaaactcaaggctttcata
tcacacaaagggccctctctccattctggccattatgtagcgacaatccggcaacctcag
gcgggcttggaggaggagagtgaggaagagtgggtattattcaacgatgaaaaagtcgtc
aaggcgcctgagaagggaggggaagagatgagaggtctggcttatctgtatatctacgag
agaatttga

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Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   RefGene (30)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (53)   

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