KEGG   Trichechus manatus latirostris (Florida manatee): 101340573
Entry
101340573         CDS       T05135                                 
Name
(RefSeq) squalene synthase isoform X1
  KO
K00801  farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
Organism
tmu  Trichechus manatus latirostris (Florida manatee)
Pathway
tmu00100  Steroid biosynthesis
tmu01100  Metabolic pathways
Module
tmu_M00101  Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:tmu00001]
 09100 Metabolism
  09103 Lipid metabolism
   00100 Steroid biosynthesis
    101340573
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:tmu01006]
    101340573
Enzymes [BR:tmu01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.21  squalene synthase
     101340573
Prenyltransferases [BR:tmu01006]
 Terpene biosynthesis
  Squalene/phytoene synthase
   101340573
SSDB
Motif
Pfam: SQS_PSY HAUS4 SCC3_C
Other DBs
NCBI-GeneID: 101340573
NCBI-ProteinID: XP_004382265
UniProt: A0A2Y9DXJ4
Position
Unknown
AA seq 485 aa
MEEKPYAEPAILMAAAACSTKAMSLFKRTFALSPAAVPRGAGLGTPPRGCPYPPSAWPSK
DWLRGEGSCGLLRSPTTAGRLPLPHSCSSTSPSSVCLLCPQDSLSNSLKTCYTYLNQTSR
SFAAVIQGLDGEMRHAVCIFYLVLRALDTLEDDMTISVEKKVPMLHNFHSYLYEPDWRFM
ESKQKDRQVLEDFPTISLEFRNLAEKYQTVIVDICRKMGFGMAEFLNKHVTSEREWDKYC
HYVAGLVGIGLSRLFSASELEDSVVGEDIDLANSMGLFLQKTNIIRDYLEDQQEGREFWP
QEVWSRYVKKLSDFAKPENIDLAVHCLNELITNALHHIPDVITYLSRLRNQSVFNFCAVP
QVMAIATLAACYNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPKS
DPSSNKTRQIISTIRTQNLPTCQLISRSHYSPIYLSFVMLLAALSWQYLSTLSQVTEDYV
QTGEH
NT seq 1458 nt   +upstreamnt  +downstreamnt
atggaggaaaaaccctacgctgaacccgcgattctcatggccgcagctgcctgcagcacc
aaggccatgtccctcttcaagcggacctttgcactgagtcccgccgcggtgcctcgaggc
gcgggcctagggacaccgccgcggggctgcccctaccctccctccgcctggccctccaag
gactggctgcggggagagggctcctgtggcctgctccggagcccgaccacagccggacgc
ctgcccctgccccattcctgctcctcgacttctccctcctctgtgtgtcttctctgccca
caggactcgctcagcaacagcttgaaaacttgctacacgtatcttaatcagaccagtcgc
agtttcgcagctgtcatccaggggctggatggggaaatgcgccatgcagtatgcatattt
tatttggttctcagagctttggacactcttgaagatgacatgaccatcagtgtggaaaaa
aaggtcccaatgttacacaactttcactcttacctttatgaaccagattggcggttcatg
gagagcaagcagaaggatcgacaagtgctagaggattttccaacgatctcccttgagttt
agaaatctggctgaaaaatatcaaacagtgattgttgatatttgtcggaagatgggcttt
gggatggcagagtttttgaataagcacgtgacctctgaacgggagtgggacaagtactgt
cactatgttgctgggctggtgggaattggcctttcccgtttgttctcggcttcagagtta
gaagactctgtggttggtgaagatatagatcttgccaactctatgggcctgtttctgcag
aaaacaaacatcattcgtgattatctggaagatcagcaggaaggaagagagttttggcct
caagaggtttggagcaggtatgttaagaagctgagtgatttcgctaaaccagagaatatt
gacttggctgttcattgcctgaatgaacttataaccaatgcattacaccacatcccagat
gtcatcacctatctttcaagacttagaaaccaaagtgtgtttaacttctgtgctgttcca
caggtaatggcgattgctactttggctgcctgttataataatcaacaggtattcaaaggc
gttgtgaagattcgaaaagggcaagcagtaacgctaatgatggatgccaccaatatgcca
gctgtcaaagctataatataccagtatatggaagaaatttatcatagaattcccaaatca
gatccatcttctaataaaacaaggcagatcatctccaccatcaggacacagaatcttccc
acttgtcagctgatctcccgaagccactactctccaatttacctgtcatttgtcatgctg
ttggctgccctgagctggcagtatctgagcaccctatcccaggttacagaagactatgtt
cagactggagaacattga

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