KEGG   Trichechus manatus latirostris (Florida manatee): 101340734
Entry
101340734         CDS       T05135                                 
Name
(RefSeq) cohesin subunit SA-1 isoform X1
  KO
K06671  cohesin complex subunit SA-1/2
Organism
tmu  Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:tmu00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    101340734
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tmu03036]
    101340734
Chromosome and associated proteins [BR:tmu03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Cohesin complex
    101340734
SSDB
Motif
Pfam: STAG SCD Cnd3 RFX5_DNA_bdg
Other DBs
NCBI-GeneID: 101340734
NCBI-ProteinID: XP_023591749
UniProt: A0A2Y9R8N8
Position
Unknown
AA seq 1325 aa
MITSELPVLQDSTNETTAHSDAGSELEETEVKGKRKRGRPGRPPTLGGLHCFLWESWAVS
AKLEKGLHCLKSTNKKPRKSLGEKSRVEAGTRGAGRGRANGHPQQNGEGEPVTLFEVVKL
GKSAMQSVVDDWIESYKQDRDIALLDLINFFIQCSGCRGTVRIEMFRNMQNAEIIRKMTE
EFDEDSGDYPLTMPGPQWKKFRSNFCEFIGVLIRQCQYSIIYDEYMMDTVISLLTGLSDS
QVRAFRHTSTLAAMKLMTALVNVALNLSIHQDNTQRQYEAERNKMIGKRANERLELLLQK
RKELQENQDEIENMMNSIFKGIFVHRYRDAIAEIRAICIEEIGVWMKMYSDAFLNDSYLK
YVGWTLHDRQGEVRLKCLKALQSLYTNRELFPKLELFTNRFKDRIVSMTLDKEYDVAVEA
IRLVTLILHGSEEALSNEDCENVYHLVYSAHRPVAVAAGEFLHKKLFSRHDPQAEEALAK
RRGRNSPNGNLIRMLVLFFLESELHEHAAYLVDSLWESSQELLKDWECMTELLLEEPVQG
EEAMSDRQESALIELMVCTIRQAAEAHPPVGRGTGKRVLTAKERKTQIDDRNKLTEHFII
TLPMLLSKYSADAEKVANLLQIPQYFDLEIYSTGRMEKHLDALLKQIKFVVEKHVESDVL
EACSKTYSILCSEEYTIQNRVDIARSQLIDEFVDRFNHSVEDLLQEGEEADDDDIYNVLS
TLKRLTSFHNAHDLTKWDLFGNCYRLLKTGIEHGAMPEQIVVQALQCSHYSILWQLVKIT
DGSPSKEDLLVLRKTVKSFLAVCQQCLSNVNTPVKEQAFMLLCDLLMIFSHQLMTGGREG
LQPLVFNPDTGLQSELLSFVMDHVFIDQDEENQSMEGDEEDEANKIEALHKRRNLLAAFS
KLIIYDIVDMHAAADIFKHYMKYYNDYGDIIKETLSKTRQIDKIQCAKTLILSLQQLFNE
LVQEQGPNLDRTSAHVSGIKELARRFALTFGLDQIKTREAVATLHKDGIEFAFKYQNQKG
QEYPPPNLAFLEVLSEFSSKLLRQDKKTVHSYLEKFLTEQMMERREDVWLPLISYRNSLV
TGGEDDRMSVNSGSSSSKTSSVRNKKGRPPLHKKRVEDESLDNTWLNRTDTTIQTPGPLP
APQLTSTVLRENSRPMGEQIQEPETEHGSEPDFLHNPQMQISWLGQPKLEDLNRKDRTGM
NYMKVRTGVRHAVRGLMEDDAEPIFEDVMMSSRSQLEDMNEEFEDTMVIDLVRKVSIFLL
LKYGRASVLPPSSSHSVWDLKSLQAAIQGATIGVSSPGARGRRRVRNRKMKCVANCLHEQ
LPPLP
NT seq 3978 nt   +upstreamnt  +downstreamnt
atgattacttcagagttaccagtgttacaggactcaactaatgaaactactgcccattca
gatgctggcagcgaacttgaagaaacagaggtcaaaggaaaaaggaaaaggggtcgtcct
ggccggcctccaaccttaggggggttacattgctttctctgggaatcatgggctgtatct
gcaaaattggaaaaaggactacattgcttaaagtctacaaataagaaacctcgaaaatct
ctaggagagaagagcagagttgaagctggaactagaggagcgggccgtggaagagctaat
gggcatcctcaacagaatggcgaaggggagcctgttacattatttgaggtggtgaaactg
gggaaaagtgcaatgcagtccgtggtggatgactggattgagtcatataaacaagacagg
gacatcgcacttctggatttaatcaacttttttatccagtgttcaggatgtcgaggtact
gtgagaatagagatgtttcgaaatatgcagaatgcagaaatcatcagaaaaatgacggaa
gaatttgatgaggacagtggtgattatccccttaccatgcctggaccccagtggaaaaaa
tttcgttcaaacttttgtgaattcattggagtcctgattcgacagtgtcaatatagcata
atttatgatgagtatatgatggacacagtaatttctcttttgactggtttgtcagactcc
caggtcagagcttttaggcatacaagtacccttgctgccatgaagctcatgactgccctg
gtgaatgttgccttaaacctcagtattcatcaggataatacacagagacagtatgaagct
gagagaaataaaatgattggaaagcgagccaatgaaaggttagaattactacttcagaaa
cgcaaagagctacaagaaaatcaggatgaaattgaaaatatgatgaactctatttttaag
ggtatatttgttcatagataccgtgacgctattgctgagattagagccatttgtattgaa
gaaattggtgtatggatgaaaatgtatagcgatgctttcctaaatgacagttacctaaaa
tatgttggctggactcttcatgacaggcaaggggaagtcaggctgaagtgtttgaaagcc
ttacagagtctatataccaatagagaattattccccaaattggagctgtttactaaccga
ttcaaggaccgcattgtatcaatgacccttgataaggaatatgatgttgctgtggaagct
attcgattggttactctgatacttcatggaagtgaagaagctctttccaatgaagactgt
gaaaatgtttaccacttggtgtactcagcacatcgccctgttgctgttgcagctggagag
ttccttcacaaaaagctgttcagcagacatgacccacaagcagaagaagcattagcgaag
aggaggggaaggaacagtccaaatgggaacctcattaggatgctggttcttttctttctt
gaaagtgagttacatgaacatgcagcctacttggtggacagtttgtgggagagctcgcaa
gaactgttgaaagactgggaatgtatgacagagttgttattagaagaacctgttcaagga
gaagaagcaatgtctgaccgccaggagagtgctcttatagaactaatggtttgtacaatt
cgtcaagctgctgaggcacatcctccagtgggaaggggtactggcaagagagtgctaact
gccaaagaaaggaaaactcaaattgatgatagaaacaaattgactgagcattttattatc
acacttcctatgttgttatcaaagtattctgcagatgcagagaaggtagcaaacttgcta
cagatcccgcaatattttgatctagaaatctatagcaccggtagaatggaaaagcaccta
gatgctttattaaagcagattaagtttgttgtggagaaacatgtagaatcagatgttcta
gaagcctgcagtaaaacctacagcatcttatgcagtgaagaatataccatccagaacaga
gttgacatagctcgaagccagctgattgatgaatttgtagatcggttcaatcattctgtg
gaagacttactgcaggagggagaagaagctgatgatgatgatatttacaatgttctttct
acattaaaacgattaacttcttttcacaatgctcatgatctcacaaaatgggatctcttt
ggtaattgctacagattattgaagactggaattgagcatggagctatgccagaacagata
gttgtacaggcactgcagtgttcccattactcaattctttggcagttggtgaaaataact
gatggttccccttccaaagaggatttgttggtattgaggaaaacagtgaaatcctttttg
gctgtttgccaacagtgcctctctaatgttaatactccagtgaaggaacaggctttcatg
ttgctctgtgaccttttgatgatttttagccaccagttaatgacaggtggcagggaaggc
ctccagcctttggtatttaatccagatactggactccagtcagaactcctcagttttgtg
atggatcacgttttcattgaccaagacgaggaaaaccagagcatggagggtgatgaagaa
gatgaagctaataaaattgaggccttacataaaagaaggaatctacttgctgccttcagc
aaacttatcatttatgatattgttgacatgcatgcagctgcagacatcttcaaacattac
atgaagtattacaatgactatggtgatattattaaggaaacattgagtaaaaccagacag
attgataaaattcagtgtgccaagacactcattctcagcttgcaacagttgtttaatgaa
cttgttcaagagcaaggtcccaacctagataggacttctgcccatgtcagtggcattaaa
gaattggcacgtcgctttgcccttacatttggactggaccagatcaagacacgagaagca
gttgctacacttcacaaggatggcatagaatttgcctttaaataccaaaatcagaaagga
caagaatatccacctccaaatctggctttccttgaagtactaagtgaattttcttctaaa
cttcttcgacaagacaaaaagactgtgcattcatacctagaaaaattcctcactgagcag
atgatggaaaggagggaagatgtatggcttccactcatctcctatagaaattcattagtc
actggaggtgaagatgatagaatgtctgtgaacagtggaagtagcagcagcaaaacctca
tcagtaaggaataagaaaggacgacccccacttcacaaaaaacgagtggaagatgaaagt
ctggataacacgtggctaaacaggactgacaccacaattcaaactcctggacccctgcca
gcaccacagctcacatccactgtactgcgggagaacagccgacccatgggggagcagatt
caggaacccgagactgaacatggttctgaaccagactttttacacaatcctcagatgcag
atctcctggttaggccagccaaaattagaagacttaaatcggaaggacagaacaggaatg
aactacatgaaagtgagaactggagtaaggcatgctgttcgaggtctaatggaggatgat
gctgagcccatctttgaagatgtgatgatgtcatcccggagtcagttagaagatatgaac
gaagaatttgaagacaccatggttattgatctggtaaggaaagtcagtatttttcttctg
ttaaaatatgggagggcttctgttctacctcctagttcatcgcatagtgtctgggatctt
aaaagcttgcaagcggccattcagggtgcaacaattggtgtctcttcacctggagcaaga
ggaaggaggagagtcaggaacaggaagatgaaatgtgtggctaactgccttcatgaacaa
ctgcctcctttgccatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (8)   
   UniProt (1)   
   RefSeq(pep) (7)   
DNA sequence (7)   
   RefSeq(nuc) (7)   
Protein domain (4)   
   Pfam (4)   
All databases (40)   

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