KEGG   Trichechus manatus latirostris (Florida manatee): 101341805
Entry
101341805         CDS       T05135                                 
Name
(RefSeq) LOW QUALITY PROTEIN: non-canonical poly(A) RNA polymerase PAPD5-like
  KO
K03514  non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
Organism
tmu  Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tmu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    101341805
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tmu03019]
    101341805
   03016 Transfer RNA biogenesis [BR:tmu03016]
    101341805
Enzymes [BR:tmu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     101341805
Messenger RNA biogenesis [BR:tmu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    TRAMP complex
     101341805
Transfer RNA biogenesis [BR:tmu03016]
 Eukaryotic type
  tRNA degradation factors
   TRAMP complex
    101341805
SSDB
Motif
Pfam: PAP_assoc NTP_transf_2
Other DBs
NCBI-GeneID: 101341805
NCBI-ProteinID: XP_023582550
UniProt: A0A2Y9QGQ7
Position
Unknown
AA seq 678 aa
MSKSNLQEEISAVCELMSPGLEEKTWTEVVNRMESVIWELRPSADVQIFGSFKTGLYLPT
SCAIHLVVFGKWENLPXGTLEEALWKHKITDDISVKVLDKAASTIIKVTDSFTEVKVDIS
FNVQNDVRAADLSKTLPRTKKYSVLPYLVLVLKQFLLQRDLNEVFTGRIGSDSLFLVAVS
FLQVHPREDACIFNTNYDVLLIEFFKLYGQHFSHLKTGIRVKDGGSYVARDAVQKNMLDG
YRPSVLHPEEPSQPGNDAGRSSYGAMQVKQAXDYAYVVFSHAVSSIAKYYPNNETESILG
RIIRVTDEVATYRDWISKQWGLQNRPEPLCNGPVSSSSATQSSWSDVDSDVTPCKTPKQL
LCCLSTGNRVGSQDVALECSQAVGKMQSTQATNPSNSTISGICPGSAELFRSSSKGFGTT
QTSHGPLMTDRQRQGKSSNXYIHGRKGKTVSCLLNEGENQGIFVCSQPGEGQIPNMSSCR
EMKADVGGCVCSLLSEALSTGISLLAQSMKELRACSVLREGEALCALQKEGVNFVREDSP
VALYQKWPFTGGQFPELGVAGAIYSQFTEETAEAQRGSILSWVTQQVGPQSVHLLTPPLV
ENHRVEGLESGSGLWTSSLECGMAPAASRGHPARLVTAHGFRNRHVMAFHTLLLGPIRLG
EEESFEVSWKRCFNGDLR
NT seq 2037 nt   +upstreamnt  +downstreamnt
atgagtaagagcaacctgcaagaagaaatcagtgctgtctgtgagctcatgtctccggga
ctggaggagaagacgtggacagaggtggtgaacaggatggagagtgtgatctgggagctc
cggcccagcgccgacgtccagatatttggaagttttaaaactggcctgtatttacctact
agttgtgccatccatcttgtggtatttgggaagtgggagaacctgcccnccgggaccttg
gaagaagctctttggaaacataaaattacagatgacatttctgtgaaagttctagacaaa
gcagccagcactattattaaggtaacagattcttttactgaagtgaaagttgatatcagc
tttaatgtacagaacgatgtgagagctgctgacctgtcaaagactttaccaaggaccaag
aaatattctgtattaccatacttggttttagtactgaaacaattcttattacagagggac
cttaatgaggtatttacaggcagaattggttctgatagtctctttttagtggcagtcagt
ttcctccaggtacatcccagggaagatgcttgcatcttcaacacaaactatgatgttctc
ttaatagaattttttaaattatatggacaacacttcagtcatttaaagactggcatccgg
gtaaaggatggtggttcgtatgtggccagagatgcagtgcagaaaaatatgctagatggc
tacaggccatcagtgcttcatcctgaagaaccttcacaaccaggtaatgatgctggaagg
agttcatatggggccatgcaagtgaaacaggccnttgattatgcctatgttgttttcagt
catgctgtgtcgtcaatagcgaagtactatcccaacaatgaaacagagagcatattaggt
agaataattagagtaacagatgaagttgccacatatagagattggatatcaaagcaatgg
ggcttgcagaataggcctgagcctttgtgcaatggtccagtgtcttcctcttctgccacg
cagtccagctggagtgatgtagattctgatgtgacaccatgcaaaaccccgaaacagctg
ctctgctgtctgtccactgggaaccgagtagggtcacaagatgtggccttggagtgctct
caggccgtcgggaaaatgcagagcacccaagccactaacccatccaacagcaccatcagt
gggatttgtcctgggtcagcagagctctttcgttcttccagcaaaggcttcggtacaact
caaaccagccatggtcccttgatgacagacagacagcgtcaaggcaaatccagtaatncg
tatatccatggcagaaaggggaagacagtttcctgcctgttgaatgagggggagaaccag
ggcatcttcgtatgttcccagcctggggaaggacagattcccaacatgtccagctgcaga
gagatgaaggctgacgtcggaggctgtgtctgctccctgctcagcgaggcactctccacc
gggatcagcctcctggcccagagcatgaaagagctgagggcctgctctgtgctccgagag
ggggaggcactctgtgcccttcagaaggaaggtgtgaactttgtgcgggaggactctccg
gtggcactttatcagaagtggccatttactggtggccagtttccggagctgggggtggca
ggtgccatttactcccagtttacagaggagacagctgaggcccagaggggcagcatcctg
tcctgggtcacacagcaggttggtccccagagtgtccacttgctcacaccacctctggtg
gagaaccaccgtgttgaaggtctggagtcgggctcaggactctggacctcgtctttggag
tgtggcatggcgcccgctgccagccgtgggcatccggctcgacttgtcactgcccacgga
tttcgcaaccggcatgtcatggccttccacactcttctcctggggcccatccggctgggg
gaggaggaatcctttgaagtcagctggaagcgctgctttaatggggacctgcgctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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