KEGG   Trichechus manatus latirostris (Florida manatee): 101343312
Entry
101343312         CDS       T05135                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DM alpha chain isoform X1
  KO
K06752  MHC class II antigen
Organism
tmu  Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04145  Phagosome
tmu04514  Cell adhesion molecules
tmu04612  Antigen processing and presentation
tmu04640  Hematopoietic cell lineage
tmu04658  Th1 and Th2 cell differentiation
tmu04659  Th17 cell differentiation
tmu04672  Intestinal immune network for IgA production
tmu04940  Type I diabetes mellitus
tmu05140  Leishmaniasis
tmu05145  Toxoplasmosis
tmu05150  Staphylococcus aureus infection
tmu05152  Tuberculosis
tmu05164  Influenza A
tmu05166  Human T-cell leukemia virus 1 infection
tmu05168  Herpes simplex virus 1 infection
tmu05169  Epstein-Barr virus infection
tmu05310  Asthma
tmu05320  Autoimmune thyroid disease
tmu05321  Inflammatory bowel disease
tmu05322  Systemic lupus erythematosus
tmu05323  Rheumatoid arthritis
tmu05330  Allograft rejection
tmu05332  Graft-versus-host disease
tmu05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:tmu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    101343312
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    101343312
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    101343312
   04612 Antigen processing and presentation
    101343312
   04658 Th1 and Th2 cell differentiation
    101343312
   04659 Th17 cell differentiation
    101343312
   04672 Intestinal immune network for IgA production
    101343312
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    101343312
   05164 Influenza A
    101343312
   05168 Herpes simplex virus 1 infection
    101343312
   05169 Epstein-Barr virus infection
    101343312
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    101343312
   05152 Tuberculosis
    101343312
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    101343312
   05140 Leishmaniasis
    101343312
  09163 Immune disease
   05310 Asthma
    101343312
   05322 Systemic lupus erythematosus
    101343312
   05323 Rheumatoid arthritis
    101343312
   05320 Autoimmune thyroid disease
    101343312
   05321 Inflammatory bowel disease
    101343312
   05330 Allograft rejection
    101343312
   05332 Graft-versus-host disease
    101343312
  09166 Cardiovascular disease
   05416 Viral myocarditis
    101343312
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    101343312
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tmu04147]
    101343312
Exosome [BR:tmu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   101343312
  Exosomal proteins of epithelial cells
   101343312
  Exosomal proteins of breast milk
   101343312
SSDB
Motif
Pfam: MHC_II_alpha C1-set Ig_2 SLC3A2_N
Other DBs
NCBI-GeneID: 101343312
NCBI-ProteinID: XP_023581498
UniProt: A0A2Y9QQK1
Position
Unknown
AA seq 285 aa
MDHEQNQGAALLQLLQLLWLLPHSWAAPEAPTPVWRDGLQNHTFLHTVYCQNGTPSLGLS
EAYDKDQLFSFDFSQNSRVPRLPEFADWAKDQGDASAISFDKEFCQMMIQEIGPQLDGKI
PVARGFPVAEVFTMKPLEYGKANTLVCFVSNLFPPTLSVNWQHHSVPVEGVSPTFVSATN
GLIFQAFSYLNFTPEPSDVYSCIVTHEIDRYTAVAFWGAHVIPLGGRLLNHASKLTCSPF
SPVPQNALPSDLLENVLCGIAFGLGVLGIIVGTVLIIYYQKPCSD
NT seq 858 nt   +upstreamnt  +downstreamnt
atggatcatgagcagaaccagggagctgcgctgctacagctgctacaacttctatggcta
ctgccccactcctgggccgcccctgaagctcctaccccagtgtggcgggatggcttgcaa
aaccacacgttcctgcacaccgtgtactgccagaacggaactccaagcctgggactctct
gaggcctatgacaaggaccagcttttctccttcgacttttcccagaacagccgcgtgcct
cgactgcctgaatttgctgactgggccaaggatcagggagatgcctctgccatttctttt
gacaaagagttctgccagatgatgatacaggaaataggcccacaacttgatgggaaaatc
ccagtggccagagggtttcctgttgctgaggtgttcacgatgaagcccctggagtatggc
aaggccaacacgctggtctgttttgtcagtaatctcttcccacccacattgtcggtgaac
tggcagcatcattcggtccctgtggaaggagtcagccccacttttgtctcagccactaat
ggactcattttccaggccttttcttatttaaacttcacacctgaaccctctgacgtttac
tcctgcattgtgactcatgagattgaccgctacactgcagttgccttttggggtgctcat
gtcattcccctggggggaaggctcctcaaccatgcctccaagctgacctgctcccctttt
tctccagtgcctcagaatgctcttccctcagatcttctggagaatgtgctgtgtggcatt
gcctttggcctgggtgtgctgggcatcattgtgggcactgtcctcatcatctactaccag
aagccttgctcagactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (24)   
   KEGG PATHWAY (24)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (4)   
   Pfam (4)   
All databases (46)   

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