KEGG   Trichechus manatus latirostris (Florida manatee): 101343799
Entry
101343799         CDS       T05135                                 
Name
(RefSeq) cullin-4A isoform X1
  KO
K10609  cullin 4
Organism
tmu  Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03420  Nucleotide excision repair
tmu04120  Ubiquitin mediated proteolysis
tmu05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:tmu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    101343799
  09124 Replication and repair
   03420 Nucleotide excision repair
    101343799
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    101343799
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tmu04121]
    101343799
   03400 DNA repair and recombination proteins [BR:tmu03400]
    101343799
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tmu04147]
    101343799
Ubiquitin system [BR:tmu04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Cullin
     101343799
DNA repair and recombination proteins [BR:tmu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      101343799
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      101343799
Exosome [BR:tmu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   101343799
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW ADH_zinc_N
Other DBs
NCBI-GeneID: 101343799
NCBI-ProteinID: XP_004383008
UniProt: A0A2Y9DYK1
Position
Unknown
AA seq 762 aa
MADETPKKGNFSALVGHTNGLTKPASLAAAAAVTTKPGGGSGSKKLVIKNFRDRPKLPDN
YTQDTWHKLHEAVKAIQSSTSIKYNLEELYQAVENLCSHKVSPTLYKQLRQVCEDHVQAQ
ILQFREDTLDSVLFLKKINTCWQDHCRQMIMIRSIFLFLDRTYILQNSMLPSIWDMGLEL
FRNHIISDKMVQSKTIDGILLLIERERNGEAVDRSLLRSLLSMLSDLQVYKDSFELKFLE
ETNCLYAAEGQRLMQEREVPEYLNHVSKRLEEEGDRVITYLDHSTQKPLIACVEKQLLGE
HLTAILQKGLDHLLDENRVPDLTQMYQLFSRVKGGQQILLQHWSEYIKTFGTTIVINPEK
DKDMVQDLLDFKDKVDHIIEVCFQKNEKFINLMKESFETFINKRPNKPAELIAKHVDSKL
RAGNKEATDEELERILDKIMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLS
KLKHECGAAFTSKLEGMFKDMELSKDIMVHFKQYMQNQSDPGSIDLTVNILTMGYWPTYT
PMEVHLTPEMIKLQEVFKTFYLGKHSGRKLQWQTTLGHAVLKAEFREGKKEFQVSLFQTL
VLLMFNEGDEFSFEEIKMATGIEDNELRRTLQSLACGKARVLIKSPKGKDVEDGDKFIFN
GEFKHKLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAIVRIMKMRKTLGHNLLVS
ELYNQLKFPVKPGDLKKRIESLIDRDYMERDKDNPNQYHYVA
NT seq 2289 nt   +upstreamnt  +downstreamnt
atggcagacgagacccccaagaagggaaacttttccgcccttgtcggacacaccaatggc
ctcacgaaacctgcttccctcgcagccgccgccgccgtcaccaccaaacccggaggcggc
agcggctccaagaaattagtgatcaaaaatttccgagacagacctaaattgcctgataat
tacactcaggatacatggcacaagcttcacgaggcagtgaaagccatacagagtagtacc
tccattaaatacaacctcgaagagctctaccaggctgttgaaaatctctgttctcacaaa
gtttccccaacactctacaaacagctacgtcaggtttgtgaagatcatgttcaagcacaa
atccttcagtttagagaagacacactagatagtgttttatttttaaaaaagattaacaca
tgctggcaggatcattgcagacaaatgatcatgattagaagtattttcttgtttttggat
cgcacttacatacttcagaattccatgcttccttctatatgggatatgggattagaacta
tttagaaaccatataattagtgataaaatggttcagagtaaaaccattgatggtattctt
ctactaattgaacgagagagaaatggtgaagctgtggacagaagtttattgcgaagtcta
ctgagtatgctctctgaccttcaggtatataaagattcatttgaactgaaatttttggaa
gaaacgaattgtttatatgctgcagaaggccaaagattaatgcaagaaagagaggttcca
gaatatcttaaccatgtaagtaaacgtttagaagaagaaggagaccgagtaatcacgtat
ttagaccacagtacgcagaaaccactaattgcttgtgtggaaaaacagctattaggagaa
catttaacagcaattctgcagaaagggcttgatcacttacttgacgagaacagagtacct
gatctcacacagatgtaccagctgttcagtcgggtgaaagggggtcagcagatactgctg
cagcactggagcgaatacatcaagacttttggaacaacaatagttatcaatcctgaaaaa
gataaagatatggtacaagacctgctagattttaaggataaagtggaccacatcatagaa
gtgtgctttcagaaaaatgaaaaatttatcaacttgatgaaggaatcctttgaaacgttt
atcaacaagcgaccaaataagcctgcagaattgattgcaaagcatgttgattcgaagtta
agagcgggcaataaagaagcaacagacgaagaactagagagaatccttgacaaaattatg
ataatattcaggtttattcacggtaaagatgtctttgaagcattttataaaaaagatttg
gcaaagagactccttgttgggaaaagtgcctcagtggatgccgaaaaatctatgttgtca
aaactgaaacacgagtgtggtgctgcttttaccagcaagctggaaggcatgtttaaggac
atggaactttcaaaggacatcatggttcattttaagcagtatatgcagaatcagagtgat
ccgggctctatagatctgacagtaaatatactaacaatgggatactggccaacatacaca
cctatggaagtacacttaactccagaaatgattaaacttcaggaagtatttaagacgttt
tatctcggaaagcacagtggtcgaaaacttcagtggcaaactactttggggcatgctgtt
ttaaaagcagagtttagagaaggaaagaaggagttccaagtttcccttttccagacatta
gtgcttctcatgtttaatgaaggggatgaattcagttttgaagaaataaaaatggctact
ggtatagaggataatgaattacgaagaacgttacagtctttggcttgtggtaaagcacgt
gtactgattaaaagtccgaagggaaaggatgtcgaagatggagacaagttcatttttaat
ggagagttcaagcacaagttgtttagaataaagatcaatcaaattcagatgaaagaaact
gttgaggaacaagttagcaccacggaaagagtgtttcaagatagacaataccagattgat
gctgctatagtaagaataatgaagatgagaaagactcttggtcataatcttctggtttct
gaactgtataatcagctgaaatttccagtaaagcctggagatttgaaaaagagaattgaa
tctcttatagacagagactatatggagagagataaagacaatcccaatcagtaccactac
gtggcataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (4)   
   Pfam (4)   
All databases (37)   

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