KEGG   Trichechus manatus latirostris (Florida manatee): 101350845
Entry
101350845         CDS       T05135                                 
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
  KO
K08285  midline 1 [EC:2.3.2.27]
Organism
tmu  Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tmu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    101350845
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tmu04121]
    101350845
Enzymes [BR:tmu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     101350845
Ubiquitin system [BR:tmu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    101350845
SSDB
Motif
Pfam: COS SPRY zf-B_box fn3 zf-RING_UBOX PRY zf-C3HC4_4 zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 Pur_ac_phosph_N zf-RING_2 zf-RING_5 U-box
Other DBs
NCBI-GeneID: 101350845
NCBI-ProteinID: XP_004386413
UniProt: A0A2Y9E569
Position
Unknown
AA seq 667 aa
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNEPVESITAFQCPTCR
HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDTNTMTSTEKVLCQ
FCDQEPAQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHEE
EKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTNLIKRNTELETL
LAKLIQTCQHVEVNASRQEAKLMEECDLLIEIIQQRRQIIGTKIKEGKVVRLRKLAQQIA
NCKQCIERSASLISQAEHSLKENDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFD
TFALDFSREKKLLECLDYLTAPNPPTIREELCTASYDTITVHWTSDDEFSVVSYELQYTI
FTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFIVKAINQAGSRSSEPGKLK
TNSQPFKLDPKSAHRKLKVSHDNLTVERDESSSKKSHTPERFTSQGSYGVAGNVFIDSGR
HYWEVVISGSTWYAIGLAYKSAPKHEWIGKNSASWALCRCNNNWVVRHNSKEIPIEPAPH
LRRVGILLDYDNGSVAFYDALNSIHLYTFDIAFAQPVCPTFTVWNKCLTIITGLPIPDHL
DCTEQLP
NT seq 2004 nt   +upstreamnt  +downstreamnt
atggaaacactggagtcggaactgacctgccctatttgtctggagctctttgaggaccct
ctcctgctgccctgcgcacacagcctctgcttcaactgtgcccaccgcatcctcgtgtca
cattgtgccaccaacgagcccgtggagtccatcaccgccttccagtgccccacctgccgg
catgtcatcaccctcagccagcgaggtctagacgggctcaagcgcaacgtcaccctgcag
aacatcatcgacaggttccagaaggcatcagtgagcgggcccaattcccccagcgagacc
cgccgggagcgggcgtttgacaccaacaccatgacctccactgagaaagttctctgccag
ttctgtgaccaggagcctgcccaggacgctgtgaagacctgtgtcacttgcgaagtgtcc
tactgtgacgagtgcctaaaagccactcacccaaataagaagccctttacaggccaccgt
ctgattgagcccattccagactcccacatccgggggctgatgtgtctggagcatgaggag
gagaaggtgaatatgtactgtgtgaccgacgaccagttaatctgtgccttgtgtaagctg
gttgggcggcaccgcgatcatcaggtggcagctttgagtgagcgctatgacaaattgaag
caaaacttagagagtaacctcaccaaccttatcaagaggaacacggaactggagaccctg
ttggctaaactcatccaaacctgccaacatgtcgaggttaatgcatcacgtcaagaagcc
aaactgatggaggagtgtgatcttctcattgagatcattcagcaaagacgacaaattatt
ggaaccaagatcaaagaaggaaaggtggtgaggctccggaaactggctcagcagatcgcc
aactgcaagcagtgcattgagcggtcagcatcactcatctcccaggcggaacattctctg
aaggagaacgaccatgcccgcttcctgcagactgctaagaatatcaccgagagagtctcc
atggcaactgcttcctcccaggttctaattcctgaaatcaacctcaatgatacatttgat
acctttgccttagatttttcccgagagaagaaattgctagaatgcctggattaccttaca
gctcccaaccctcccacgattcgagaagagctctgcacagcttcttacgataccatcact
gtccactggacctccgacgatgagttcagcgtggtctcctatgagctgcagtacaccatc
ttcaccggacaagccaacgttgttagtctgtgtaattcagccgatagctggatgatcgtg
cccaacatcaagcagaaccactatacggtgcacggtctgcagagtggcaccaagtacatc
ttcattgtcaaggccatcaaccaggcaggcagccgcagcagcgagcctgggaagctgaag
acaaacagccaaccatttaagctagaccccaagtctgcacatcgaaaactgaaggtgtcc
catgataacttgacagtagaacgtgatgagtcttcatccaaaaagagtcacacgcctgaa
cgcttcaccagccaagggagctatggcgtagctggaaacgtgttcattgatagtggccgg
cattactgggaagtggtcataagcggaagcacatggtatgccattggcctggcctacaaa
tcggccccgaagcacgagtggattgggaagaactcggcttcgtgggcgctctgccgctgt
aacaataactgggtggtaagacacaatagcaaggaaatccccattgagccagccccccac
ctgaggcgcgtcggcatcctgctggactacgacaacggctctgtcgccttttatgatgct
ttgaactccatccacctctacaccttcgacatcgcctttgcgcagcccgtgtgtccgacc
ttcactgtgtggaacaaatgtttgaccattataactggccttccaatcccagaccacttg
gactgcacggagcagctgccgtga

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