KEGG   Trichechus manatus latirostris (Florida manatee): 101352346
Entry
101352346         CDS       T05135                                 
Name
(RefSeq) ATP-binding cassette sub-family A member 1 isoform X1
  KO
K05641  ATP-binding cassette, subfamily A (ABC1), member 1
Organism
tmu  Trichechus manatus latirostris (Florida manatee)
Pathway
tmu02010  ABC transporters
tmu04148  Efferocytosis
tmu04975  Fat digestion and absorption
tmu04979  Cholesterol metabolism
tmu05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:tmu00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    101352346
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    101352346
 09150 Organismal Systems
  09154 Digestive system
   04975 Fat digestion and absorption
    101352346
   04979 Cholesterol metabolism
    101352346
 09160 Human Diseases
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    101352346
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:tmu02000]
    101352346
Transporters [BR:tmu02000]
 ABC transporters, eukaryotic type
  ABCA (ABC1) subfamily
   ABCA1, 2, 3, 4, 7, 12, 13 subgroups
    101352346
SSDB
Motif
Pfam: ABC_tran ABC2_membrane_3 AAA_21 DUF4162 AAA_23
Other DBs
NCBI-GeneID: 101352346
NCBI-ProteinID: XP_004372260
UniProt: A0A2Y9QP23
Position
Unknown
AA seq 2261 aa
MAYWPQLRLLLWKNLTFRRRQTCQLLLEVAWPLFIFLILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGEAPGVVGNFNKSIVSRLFSDAQRLLLYSQKDT
SMKDIHKVLRTLRQIENSSSNLTLQDFLVHNETFSGFLHHNLSLPRPTVDKMMKADISLH
KVFLHGYQLHLTNLCNGSKLGEVIQLGDQEVSQLCSLPREKLDAAEQVLRSNMDVLKPIL
AELNSSSPFPSKELAEATKTLLDSLGTLAQELFTVRSWSDMRQEVMFLTNVNSSSSPTQI
YQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNDTGEDVGTFYDNSTTPYCNDLMK
NLESSPLSRIIWKALKPLLVGKILYTPDTPATRQVMAEVNKTFQELAVFHDLEGMWEELS
PKIWTFVESSQEMDLIRTLLDSRGSDHFWEERLDGLGWTAQDIAVFLAKHPEDVEAINGS
VYTWREAFNETNQAIQTISRFMECVNLNKLEPIATEVRLINKSMELLDERKFWAGIVFTG
ITSDSVELPHHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFTYLQDVV
EQAIIRVLTGSEKKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIV
YEKEARLKETMRIMGLDSGILWFSWFISSLIPLLVSASLLVVILKLGNLLPYSDPSVVFV
FLSVFAVVTILQCFLISTFFSRANLAAACGGIIYFMLYLPYVLCVAWQDYVGFTPKIFAS
LLSPVAFGFGCEYFALFEEQGTGVQWDNLFESPVEGDGFNFTTSVSMMLFDTFIYGVMTW
YIEAVFPGQYGIPRPWYFPCTKSYWFGEESDEKSHPCSSQKGISEICMEEEPTHLKLGVS
IQNLVKVYRDGMKVAVDGLRLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYIL
GKDIRSEMSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQMALDVV
LPPSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVDSSLS
SCRNSSSTVSYLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKHVAEARLVEDI
GHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEDSGVDAE
TSDGTLPARRKRRAFGDRQSCLRPFTADDAVDPNDSDIDPESRETDLLSGMDGKGSYQVK
GWKLTQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLELQ
PWMYSEQYTFVSNDAPEDISTQKLLNALTKDPGFGTRCMEGNPIPDMPCLVGEEEWITAP
VPQTITDLFQKGNWTMENPSPACQCSSDKIKKMLPVCPPGAGGLPPPQRRQNTADILQNL
TGRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGASNSQVLPPSEEVNDAIKQVKK
HLKLVKDSSADRFLSSLGRFMTGLDTKNNVKVWFNNKGWHAISSFLNVINNAILRANLQK
GENPSKYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQER
VSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVLAL
LLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNNIN
DILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEG
VVFFLITVLIQYRFFIRPRPVNTKLPPLNDEDEDVRRERQRILDGGGQNDILEIKDLTKI
YTRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAFLNKNSILSN
IDEVHQSMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLLKYGEK
YAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIIKEGRSVVLT
SHSMEECEALCTRMAIMVNGKFRCLGSVQHLKNRFGDGYTIVVRIAGTNPDLKPVQEFFG
LAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSHSKKRLHIEDYSVSQTTLDQVFVNF
AKDQSDDDHLKDLSLHKNQTVVDVAVLTSFLQDEKVKESYV
NT seq 6786 nt   +upstreamnt  +downstreamnt
atggcttattggcctcagttgaggttgctgctgtggaagaacctcactttcagaagaaga
caaacgtgtcagttgttgctggaagtggcatggcctctgtttatctttctgatcctgatt
tctgttcggctgagctacccaccctatgaacaacatgaatgccactttccaaacaaagcc
atgccctctgcaggaacacttccttgggttcaggggattatctgtaatgccaacaacccg
tgtttccgttatccgactcctggtgaggctcctggggttgttggaaattttaacaaatcc
atagtgtctcgcctattctcagatgctcagagactacttttatatagccagaaagacacc
agcatgaaggatatacacaaagttctgagaacattacggcagatcgagaattccagctca
aatttgacacttcaggacttcctggtacacaatgaaaccttctctggattcctgcatcac
aacctctctctgccaaggccaactgtggacaagatgatgaaggcggatatcagtctccac
aaggtatttttgcatggataccagttacatttgaccaatctatgcaatggatccaaatta
ggagaggtgattcaacttggtgaccaagaagtttcccagctttgcagcctgccaagggag
aaactggatgctgcagaacaagtacttcgttccaacatggacgtcctgaagccgatcctg
gcagaactaaactcctcatctcccttcccaagcaaggagctggctgaagccacaaaaact
ttgctggatagtcttgggaccctggcccaagagctcttcaccgtgaggagttggagtgac
atgcggcaggaggtgatgtttctgaccaatgtgaacagctccagctcccctacacagata
taccaggcagtgtcccgcattgtctgtggccatcctgagggtgggggcctgaagatcaag
tccctcaactggtatgaggacaacaactacaaagccctctttggaggcaatgacacagga
gaagatgttggcaccttctatgacaattctacaaccccttactgcaacgatttgatgaag
aatttggagtccagtcctctttcccgcattatctggaaagctctcaagcctctgcttgta
gggaagatcttatatacacctgacactccagccacaaggcaggttatggctgaggtgaac
aagaccttccaggagctggctgtgttccatgatctggaaggcatgtgggaagaactcagc
cccaagatctggacctttgtggagagcagccaagaaatggaccttatccgaacactgttg
gacagcagaggcagtgaccacttttgggaagagcggttagatggcttagggtggacagcc
caagacattgcggtgtttctggccaagcacccagaggatgttgaggccattaatggctct
gtgtacacctggagagaggcgttcaacgagaccaaccaggcaatccagaccatatctcgc
ttcatggagtgtgtcaacctgaacaaactggaaccaatagcaacagaagtccggctcatc
aacaagtccatggaactgctggatgagaggaagttttgggctggtattgtgttcactgga
attacttcggacagtgttgagcttccccatcatgtcaagtacaagattcgaatggacatt
gacaatgtggagaggactaataaaatcaaggatgggtactgggacccgggtcctcgggct
gacccctttgaggatatgcgatacgtctgggggggcttcacctacttgcaggacgtggta
gagcaggccatcatcagggtgctgacgggcagtgagaagaaaactggtgtctacgtacag
cagatgccctatccctgttacgttgatgacatcttcctgcgggtaatgagccggtccatg
cccctcttcatgacgctagcctggatctactcagtggctgtaatcatcaagggcatcgtg
tacgagaaggaggcgcgactgaaggagaccatgcgcatcatgggcctggacagcggcatc
ctctggtttagctggttcatcagcagcctcatccctctgcttgtgagcgccagcctgctg
gtcgtcatcctgaagttaggaaacctgctgccctatagtgaccccagcgtggtgtttgtc
ttcctttctgtgttcgctgtggtgaccatcctgcagtgcttcctgatcagcacgttcttc
tccagagccaacctggcagcagcctgtgggggcatcatctacttcatgctgtacctgccg
tacgtcctgtgtgtggcgtggcaggactatgtgggcttcacccccaagatctttgcaagc
ctgctgtctcctgtggcttttgggtttggctgtgagtacttcgcccttttcgaggagcag
ggcactggcgtgcagtgggacaacctgtttgagagccctgtggagggagatggcttcaac
tttactacctcagtctccatgatgctgtttgacactttcatctatggggtgatgacatgg
tacattgaggctgtctttccaggtcagtatggaattcctaggccctggtattttccttgt
actaagtcctattggttcggtgaggaaagtgatgagaagagccatccctgttccagccag
aagggaatatcagaaatctgcatggaggaggagcccactcacctgaagctgggtgtgtcc
attcagaacctggtgaaggtttaccgagatggcatgaaggtggcagtcgatggcctgaga
ctgaatttttatgaaggccagatcacctccttcttgggccacaatggagcgggaaagacc
accactatgtccatcctgactgggttgttcccacccacctcgggcaccgcctatatcctg
gggaaggacattcgctcagagatgagcacaatccggcagaacctgggggtctgtccccag
cataatgtgctgtttgacatgctgactgtcgaagagcacatctggttctatgcccgcctg
aaagggctctctgagaagcacgtgaaagccgagatggagcagatggctctggatgttgtc
ctgccacccagcaagctaaaaagcaaaacaagtcagctgtcaggtggaatgcagagaaag
ctgtctgtggcattggcctttgtggggggatctaaggttgtcattctggatgagcccaca
gctggcgtggacccttactcccgcagggggatatgggagctgctgctgaaatatcgacag
ggccgcaccattattctctccacacaccacatggatgaagcggacattctgggggacaga
attgccatcatttcccatgggaagctgtgctgtgtgggctcctccctgttcttgaagaac
caactgggaacaggctactacctcactctggtcaagaaagatgtggactcctccctcagt
tcctgcagaaatagcagtagcactgtgtcatacctgaaaaaggaggacagtgtttctcag
agcagttctgacgctggcctgggcagcgaccatgaaagtgacacgctgactatcgatgtc
tccgctatctccaacctcatcaggaagcatgtggctgaggcacggctggtggaagacatt
gggcatgagctgacctacgtgctgccctatgaagctgccaaggagggagcttttgtggaa
ctcttccatgagattgatgacaggctctcagatctgggcatctccagttatggcatctca
gagaccaccctggaagaaatattcctcaaagtggctgaagatagtggagttgatgctgag
acctcagatggcaccttgccagcaagacggaaaagacgggcctttggtgacaggcagagc
tgtcttcgtccattcacagcagatgatgctgtggatcccaatgattctgacatagaccca
gagtccagagagacagacctgctcagcggaatggacggcaaaggctcctaccaagtaaag
ggctggaaactcacacagcaacagtttgtggcccttttgtggaagaggctgctgattgcc
aggaggagtcggaagggattctttgctcagattgtgctgccagctgtgtttgtctgcatc
gccttggtgttcagcttgatcgtgccaccctttggcaagtaccccagcctggaacttcaa
ccctggatgtacagcgagcagtacacgtttgtcagtaatgatgctcctgaggacatcagc
acccagaaactcttgaatgccctcaccaaagaccctggcttcggaacccggtgtatggaa
ggaaatccaattccagacatgccctgcttggtgggggaagaggagtggatcactgcccca
gttccccagaccatcacggacctcttccaaaaggggaactggacgatggagaacccctca
cctgcctgccagtgtagcagtgacaaaatcaagaagatgctgcccgtgtgtcccccaggg
gcaggggggctgcctcctccacaaagaagacagaacactgcggacatccttcagaacctg
acgggaagaaacatttcagattatctggtaaagacatatgtgcagatcatagccaaaagc
ttaaagaacaagatctgggtgaatgaatttaggtatggcgggttttccctgggtgccagt
aattctcaagtacttcctccaagtgaagaagttaatgatgccatcaagcaagtgaagaaa
cacttgaagctggtcaaggacagttctgcagatcgatttctcagcagcttaggaaggttt
atgactggattggacaccaaaaataatgtcaaggtgtggtttaacaacaagggctggcat
gccatcagctctttcctgaatgtcatcaacaatgccattctccgggccaacctgcagaag
ggagagaacccgagcaaatacgggattactgcttttaatcaccctctgaatctcactaag
cagcagctctcagaagtggctctaatgaccacatcggtggacgtccttgtttccatctgt
gtcatctttgcgatgtccttcgtgccggccagctttgtcgtgttcctgattcaggagcgg
gtcagcaaagcgaagcacctgcagttcatcagtggagtgaagcccgtcatctactggctt
tccaattttgtctgggatatgtgcaactatgtggtccctgcgacattggtcattatcatc
ttcatctgcttccagcagaagtcctatgtgtcctccactaacctgcctgtgctagccctt
ctacttttgctgtatgggtggtcaatcacacctcttatgtacccagcctccttcgtgttc
aagatccctagcacagcctatgtggtcctcaccagcgtgaacctctttattgggatcaat
ggcagtgtcgccacttttgtactggagctcttcaccaacaataagctgaataacatcaat
gatatcctgaagtctgtgttcttgatcttcccacatttttgcctgggacgggggctcatt
gacatggtgaaaaaccaggcaatggctgatgccctggaaaggtttggggagaaccgcttt
gtctcgccactctcttgggacttggtgggacggaacctcttcgccatggccgtggaaggg
gtggtattcttcctcattactgttctgatccagtacagattcttcatcaggcccagacct
gtaaatacaaagcttcctcctctgaatgatgaggatgaagacgtgaggcgggaaagacag
agaattcttgatggtggaggacagaatgacatcttggaaataaaagacttgactaagatc
tatacaaggaagaggaagcctgcagttgacaggatttgcgttggcattcctcctggcgag
tgttttggacttctgggagttaatggggctgggaaatcatcaactttcaagatgttaact
ggagataccactgttaccagaggagatgcttttcttaacaaaaatagtattttatcaaat
atcgatgaagtacatcagagcatgggctattgccctcagtttgatgccatcacagagcta
ctgactgggagagaacatgtggagttctttgctctcttgagaggagtcccagagaaggaa
gttggcaaggttggtgaatgggcaattcggaaactgggccttctgaaatacggagaaaaa
tatgctggtaactatagtggaggcaacaagcgcaagctctccacagccatggctttgatc
ggtgggcctcctgtggtgtttctggatgaacccaccacaggcatggatcccaaagcccgg
agattcttgtggaattgtgccctaagtatcatcaaggaggggagatcagtagtgcttaca
tctcatagtatggaagaatgtgaagctctttgcactaggatggcaattatggtcaatggg
aagttcaggtgtcttggcagtgttcagcatctgaaaaacaggtttggagatggttataca
atagttgtacgaatagcaggaacaaaccctgacctgaagcctgtccaggaattctttgga
cttgcctttccaggaagtgtcctaaaagagaaacaccgaaatatgctacaataccagctt
ccatcttcattatcttctctggccaggatattcagcatcctctcccatagcaaaaaacga
ctccacatagaagactactctgtttctcagacaacacttgaccaagtatttgtgaacttt
gccaaggaccaaagtgatgatgaccacttaaaggacctgtcattacacaaaaaccagaca
gtagtggatgttgcagttcttacatcttttctgcaggatgagaaagtcaaagaaagttat
gtatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (17)   
   UniProt (1)   
   RefSeq(pep) (16)   
DNA sequence (16)   
   RefSeq(nuc) (16)   
Protein domain (5)   
   Pfam (5)   
All databases (71)   

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