KEGG   Trichechus manatus latirostris (Florida manatee): 101360549
Entry
101360549         CDS       T05135                                 
Name
(RefSeq) synaptonemal complex protein 2 isoform X3
  KO
K19529  synaptonemal complex protein 2
Organism
tmu  Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:tmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tmu03036]
    101360549
Chromosome and associated proteins [BR:tmu03036]
 Eukaryotic type
  Meiosis-specific proteins
   Synaptonemal complex
    101360549
SSDB
Motif
Pfam: SYCP2_ARLD SYCP2_SLD PF0610-like_N
Other DBs
NCBI-GeneID: 101360549
NCBI-ProteinID: XP_004370583
UniProt: A0A2Y9DAA5
Position
Unknown
AA seq 1570 aa
MYYFGVLKFLNFKNMQQILRYTKYMFSFIDVCFILRFLNEAKMPVRPDLQQLEKCIDDAL
RKNDFKPLRTLLQIDICEDVKIKCSKQFFHKLDELICRELKKKDIQTVSAILVSVGRCGK
NISILGQAGLSTMIKQGLVQKMVVWFEKSKEIILNQGNSKDEAVTNMIEDFFDVLMVIHD
VNDEGKRQIVESFAPRICSLVIDSRVNIYIQQETLKKMNAMLDKMPQDARKILSNQEMLI
LMSSMGERILDAGDYDLQVGIVEALCRMTTEKQRQELACQWFSMDFVANAFKGIKDSEFE
TDCRIFLNLVNGMLGDKRRVFTFPCLSAFLDKYELQIPSDEKLEEFWIDFNLGSQTLSFY
IAGDNDDHQWEAVIVPEETVQLYSIEVRESKKLLTIILKNIIKISKREGKELLLYFDASL
EITNVTQKIFGVNKYREFTRKQGISVAKTSVHILFDASGSQILVPESQISPAEEEPVSLK
EKPNPQKEFAKPPKYIKNSNQEDRKNSLPQIITPSKRKMSEASMIVPGADRYTVRSPILL
INTSTPRRRRIKPPLQMMSSAEQPGVSEISENGVNNAGSLKSKPSEGRNRGNNTNKHVKA
AEVVEKTEKKGNEFPKQNFNEFQDINPDSKAVVKTDKPVLPGVLDNICENKTNSKWACWT
PVKNIRLCSSQKASTSSEDTFNQDLVIHKKLTKQKSSSSISDDNSEETGKMQSTKEIAAD
NKVDKAELEICDRDNQQLNHPKYLEEKNIEHTKQSDWRIESETTFKSVLLNKTVEESLIY
RKKYIMSKDVNTAVCDKNPSPRKNVKSQRKSGKRLTSELNSCDLKQKKMREKPKGRGFAD
AAESLISQINKRYKVKDDVKSTRKLKESWVDSGFSNRSDLQLSKEKVQKKSFRQLKTTFV
NVTSECPLDDVYNFNLNGADEPVIKLGVQEFQATAREACVDNSIKLVGVRNHDELEPSLK
TKDKRIIKNHKKKHLFSDTEAEYKCDDNKTDISWLREPKSRPQLIDYSRNKNVKGQKSGK
PRPSLERGQPRYKATPSKNITKKVDETVPDRRTRLPRRAAKTKKNYKDLSNSESESESEF
SHPLKEKLLVKEENSHSRSKTMKLPTKPQNASPAETRQERPRERGRESSLLVKDALRGNS
LDFSSVSLSETSSSIEVMRGIEKITERNFTQNYDCLTTKSVSPSPKNTSLESLNSKNGVG
SSIKSPQSSEKNLTCARESCSPIPRLLFLPSHTPFTKDNTVVNRKKINSVVALTQETQNC
SSYSDVSSFNSEKVFLENEFPNINENHIQRKEEESFSSPLSMSSERRERIWYNMSYGTTH
VSGPTQHSNRKRMYIEDNLSNPDDVEMEEEEERRANLLSGKLSKIQDTHHHSYKMSESIS
AFSAYEFYIPGENWATGCSGVGVMCEEISKEFKRRIQARRKRMDHFTKQTWKSAQHMKTV
NHQIQEYRNKKLDKFQFTIIQELKNFEKESQSLKYLEKEFVDFWEKLFHKFSAYQKNEQQ
RLHLLRTSFDKNIIRNTDNEESIFASEMCLMKENMKRLQGRLLKEMQEEELLNIRRGLMS
LFMSDEMLTM
NT seq 4713 nt   +upstreamnt  +downstreamnt
atgtactactttggtgtgttaaaatttttaaactttaaaaatatgcaacagattttaaga
tatacaaaatatatgttttcttttatagatgtttgttttattctgaggtttttaaatgaa
gccaaaatgccagtaagaccagatctccagcagttggaaaaatgcatcgatgatgcatta
agaaaaaatgatttcaaacccttaagaacacttttacaaattgatatttgtgaagatgtg
aagattaaatgcagcaaacagttttttcacaagttggacgaacttatatgcagggaactt
aaaaaaaaggatatccaaactgtttcagctattttggtttctgttggaagatgtggtaaa
aatatcagtatattgggacaagctggactttcaactatgataaaacaaggactagtccaa
aagatggttgtctggtttgaaaaatctaaggagattattctcaatcaaggaaattcaaaa
gatgaagctgttacaaatatgatagaagacttctttgatgttttgatggtcatacatgat
gtcaatgatgaaggtaaaaggcaaatagtggaaagttttgcacctcgaatttgttccctg
gttattgactcaagagtgaatatctatattcagcaggagactctaaaaaaaatgaatgct
atgcttgacaaaatgcctcaggatgccaggaaaatactctctaatcaagaaatgttaatt
ctcatgagtagtatgggggaaaggattttagatgctggagattatgacttacaagtaggc
atcgtagaagctttatgtagaatgaccacagaaaaacaaagacaagaactggcatgtcag
tggttttcaatggattttgttgctaatgcatttaaaggaattaaagactctgaatttgaa
acagattgcaggatatttctcaaccttgtaaacggcatgcttggagacaagagaagggtc
tttacatttccttgtttatcagcatttcttgataaatatgaattacaaataccatcagat
gaaaaacttgaggaattttggattgattttaatctgggcagccagactctttcgttctac
attgctggagataatgatgatcatcagtgggaagctgtcattgtgcctgaggaaacagta
cagttatacagcattgaagtgagagagtcgaagaagctactaaccataattctgaaaaat
ataataaaaattagtaaaagagaagggaaggaattgcttttgtattttgatgcgtcatta
gaaatcactaatgtgactcaaaaaatttttggtgtaaataagtatagggaatttaccaga
aaacaaggtatttcagttgccaaaacatctgtgcatatactttttgatgcaagtggatca
cagattctagtgccagaaagtcaaatctcaccagctgaagaagaacctgttagtttaaaa
gaaaaacctaatccccaaaaggaatttgctaaacctccaaaatatatcaaaaacagtaat
caagaggacagaaaaaatagtctgccccagataattactcctagcaaaagaaaaatgtct
gaagcatctatgattgttcctggtgcagatcgatacaccgtgagaagtccaatactatta
atcaacacgtcaacaccacgaagaaggagaattaaaccacccctgcaaatgatgagctct
gcagagcaacctggtgtttctgaaatatcggaaaatggagtgaataatgctggatcactt
aaatctaaaccatctgaaggaagaaacagaggcaataatacaaacaaacatgtgaaagct
gctgaagttgtagaaaagacagaaaagaagggcaatgaattcccaaagcaaaattttaat
gaattccaggatattaatcctgattccaaggcagtggtaaaaacagataaacctgtatta
cctggtgttttggacaatatctgtgaaaataaaacaaactccaagtgggcatgttggaca
cctgtaaaaaatattcgactttgtagtagccaaaaagcaagtacttcatcagaagacaca
tttaatcaagatcttgttatccacaaaaaactgactaaacaaaaatcatcctcttcaata
tctgatgataattccgaagaaacaggaaagatgcaaagtacaaaagaaatagcggcagat
aacaaagtagataaagcggaattagaaatctgcgacagagacaatcaacaactaaatcat
cctaaatatttggaggagaagaatatcgaacataccaagcagagcgattggcgtattgag
tctgaaactacttttaaatcagtgctcttaaataagacagttgaagaatctctgatctat
aggaagaaatacataatgtcaaaagacgtgaatactgctgtttgcgataaaaacccttct
cctagaaaaaatgtgaaaagtcagagaaaatcagggaaaagactgacttctgaactcaat
tcctgtgatttgaaacaaaaaaaaatgagagaaaagccaaaagggagaggatttgctgat
gcagcagaatccttgataagccaaattaacaagcgttacaaagtgaaggatgatgtaaag
tctacaagaaaactaaaggagtcttgggttgacagtggtttttcaaacagatctgatcta
caactcagtaaggaaaaggttcagaaaaaaagttttagacagctgaagactacttttgtt
aatgttacttctgaatgcccattggatgatgtttacaattttaatttgaatggagctgat
gaacctgttataaaacttggagtccaggaatttcaagctacagctagagaagcctgtgtg
gataattcaataaaattggtaggtgtaaggaatcatgatgaacttgaaccttctctcaaa
acaaaagataaaagaattataaaaaatcataaaaagaagcatctttttagtgatactgaa
gcagagtacaaatgtgatgacaacaagaccgatatcagctggttaagagaaccgaagtcg
agaccgcagctgatagactatagcaggaataaaaacgtgaagggacagaaaagtggtaaa
cccagaccgtccttggaaaggggacaaccaagatacaaagcgacacccagcaaaaacatc
accaaaaaggtagatgagacagttccagataggcgaaccagacttccacgaagagcagca
aaaactaaaaaaaattataaagatctctcaaattcagaatcagagagtgagtcagaattt
tcacatccacttaaagagaaattgctagtaaaggaggaaaacagccattccagaagtaaa
accatgaagctgccgacgaaaccacagaatgcttcccctgctgagacaagacaggagcgg
cccagagaacgggggcgggagagctcacttctagtaaaagatgcgttgagaggcaacagc
ctggacttctcctctgtgtctttatctgagacttcatcatctatagaagtaatgagaggt
atagagaaaataacagaaaggaattttactcagaattatgactgtttaacaacaaaatct
gtatcaccttctccaaaaaacacatcacttgagtccttaaatagtaaaaatggagttgga
agttcaataaagtcacctcaaagcagtgagaaaaatttaacatgtgcaagagaaagttgc
tcaccaattccacgtctactctttttgcccagccatactccattcactaaggataatact
gtcgtgaatagaaaaaagataaattcggtggtggcacttacacaagaaacacaaaattgc
agcagctattcagatgtaagcagttttaattcagaaaaagtgtttctagaaaatgaattt
ccaaatatcaacgaaaatcacatacagagaaaggaagaggaaagcttttcatctccgtta
tccatgtctagtgaaagacgagagagaatctggtataacatgtcttatggcactacccat
gtatcaggccccactcagcattctaatcgcaaacgaatgtacatagaagataatctaagt
aatcccgatgatgtagaaatggaagaggaagaagaaagaagagcaaacttgctttctgga
aaactgtctaaaatccaagatacacatcatcacagctataaaatgtctgaaagtatatct
gcattttcagcatatgagttttatattcctggggagaactgggcaactggatgttcaggt
gtaggggtgatgtgtgaggaaatcagtaaagaatttaagaggagaattcaggctcgccgc
aaaaggatggatcattttactaagcagacttggaaatcagctcaacatatgaaaactgtg
aaccatcaaattcaagagtataggaataaaaaacttgataaattccaattcaccatcata
caggagctgaagaactttgaaaaagagtcacagtctttaaaatatttggagaaggaattc
gtggacttttgggaaaagctatttcacaagttcagtgcctatcagaagaatgaacagcag
aggcttcaccttttgagaacctcatttgataaaaatatcatccgcaatactgataatgaa
gaaagtatttttgcatctgagatgtgcttgatgaaagaaaacatgaaaaggctacaaggc
cggcttctcaaggaaatgcaagaagaggagcttcttaatatacgcagagggctgatgtca
ttattcatgtctgatgagatgttaactatgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (50)   
   KEGG ORTHOLOGY (1)   
   RefGene (46)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (3)   
   Pfam (3)   
All databases (63)   

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