KEGG   Thauera aminoaromatica: Tmz1t_3064
Entry
Tmz1t_3064        CDS       T00804                                 
Name
(GenBank) tRNA pseudouridine synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
tmz  Thauera aminoaromatica
Brite
KEGG Orthology (KO) [BR:tmz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tmz03016]
    Tmz1t_3064
Enzymes [BR:tmz01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     Tmz1t_3064
Transfer RNA biogenesis [BR:tmz03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    Tmz1t_3064
 Prokaryotic type
    Tmz1t_3064
SSDB
Motif
Pfam: PseudoU_synth_1 PD40
Other DBs
NCBI-ProteinID: ACR01662
UniProt: C4KB86
Position
complement(3316919..3317716)
AA seq 265 aa
MRRIVLGLEYAGDAFCGWQSQAHGRTVQDVLERALAQIAGEPVRTHCAGRTDTGVHASAQ
VAHFDTRAVRPASAWVRGVNALLPPAVVVRWSTEVGDDFHARFLACERQYRYILHNAPTR
PAMLAGRVGWYHPALDVERMAAAAQCLVGTHDFSSFRAAGCQAKTPVRVMHEARVVRQGE
YLLFDFRANGFLHHMIRNLVGALVYVGKGRYPVAWMRELLEARDRARAAPTFSPDGLYLC
GVAYPPRWSLPGDGRIIALPQLPLV
NT seq 798 nt   +upstreamnt  +downstreamnt
atgaggcgcatcgtgctcggcctcgaatacgccggcgacgccttctgcggctggcagagc
caggcccatggccgcaccgtgcaggacgtgctcgagcgcgcgctcgcgcagatcgcgggc
gagccggtgcgcacccactgcgccggacgcaccgacaccggcgtgcatgcgagcgcgcag
gtggcgcatttcgacacccgcgccgtgcgcccggcctcggcctgggtgcgcggtgtcaac
gcgctgctgccgccggccgtggtggtgcgctggtcgaccgaggtgggcgacgacttccac
gcccgcttcctggcctgcgagcggcagtaccgctacatcctgcacaatgcgccgacgcgg
ccggcgatgctggccgggcgggtgggctggtaccacccggcgctcgacgtcgagcgcatg
gccgccgccgcgcagtgcctggtcggcacccacgacttctcaagttttcgcgctgccggc
tgtcaggcgaagacgccggtgcgggtgatgcacgaggcccgcgtggtccgccagggcgag
tacctgctgttcgatttccgcgccaacggcttcctccaccacatgatccgcaacctggtc
ggcgcgctggtgtacgtcggcaaggggcgctatccggtggcgtggatgcgcgagctgctc
gaggcccgcgaccgcgcgcgcgcggcgccgaccttctccccggacgggctctacctgtgc
ggcgtggcctacccgccgcgctggtcgctgccgggtgatgggcgtatcatcgcgctgccc
cagctacccctcgtctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system