KEGG T00847: CTN

Thermotoga neapolitana: CTN_1234

Entry

CTN_1234          CDS       T00847

Name

(GenBank) Putative uncharacterized protein

K14415

tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]

Organism

tna Thermotoga neapolitana

Brite

KEGG Orthology (KO) [BR:tna00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tna03016]
    CTN_1234
Enzymes [BR:tna01000]
6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     CTN_1234
Transfer RNA biogenesis [BR:tna03016]
Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    CTN_1234
Prokaryotic type
   tRNA splicing ligases
    CTN_1234

SSDB

Motif

Pfam:

RtcB

Other DBs

NCBI-ProteinID:

ACM23410

UniProt:

B9K8X7

Position

1195769..1197193

AA seq 474 aa
MKIERLDKYMWRIPREGKMRVDAIVFTDAESVDDPQFREAMKQLMNVATLPGIVKYALAM
PDIHWGYGFPIGGVAAFDAKDGIISPGGVGFDINCGVRLMKTDLTYEDVRDRLRAIVEAI
YETVPAGVGARGDIVLGKKGLRKVLVEGAEWAVKAGYGLEEDLERIEDGGKIHPADPNYV
SEEAFERGSDELGTLGAGNHFIEVQMVEEIYDRDLAEFFGLEVGTITIMIHSGSRGFGHQ
VATDYIRLMRDRLKEHNRDLPDKQLINAPFEHPLGQAYYSAMNCAANYAFANREILGHLV
RKAFWKVFGKDTRVELIYDVAHNIAKVEEYEIDGKRKKLVVHRKGATRSLGPGNEKVPEI
YREVGQPVIIPGDMGTASYLLIGTRKAEEKTFGSTAHGAGRVLGRSAALKRWSYREILDE
LERKNIIVMSKSKKTLVEEAPEAYKDVDRVVHIVHEIGISRKIARMVPLGVVKG

NT seq 1425 nt +upstreamnt +downstreamnt
atgaagatagaaagactcgataaatacatgtggaggatccccagagagggaaagatgagg
gtggacgccattgttttcacggacgctgagagtgtggatgaccctcaattcagagaggcc
atgaaacaacttatgaacgtggcaacgcttcctgggatcgtgaagtacgcccttgccatg
cccgacatacactggggttacggcttcccgataggtggtgttgcagctttcgatgcaaaa
gacggaatcatctcacctggaggggtgggtttcgacataaactgcggtgttcgactgatg
aagacagatctcacatacgaagatgtcagggatagattgagggccatcgtcgaagccatt
tacgaaacagtacccgccggtgttggtgcaaggggagacatcgtccttggaaaaaaaggt
ctcaggaaggtcctcgtcgagggtgcagaatgggctgtaaaggctggatatggcctggaa
gaggaccttgagaggatagaggacggtggcaagatacaccccgccgatcccaactatgtg
tctgaggaagccttcgagaggggaagcgacgaacttggaacgcttggagcgggaaatcac
ttcatagaggtccagatggtggaggagatctacgacagggacctggcagagttcttcggc
ctggaagtgggtacgataacgatcatgatacactctggaagcaggggttttggacatcag
gtggcgacggactacataagactcatgagggacaggctgaaggaacacaacagagatcta
cccgacaagcaactcataaacgcaccgttcgagcatccactcggccaggcatattactct
gccatgaactgtgcggcaaattacgcgttcgcaaacagagagatactcgggcacctcgtc
agaaaggccttctggaaggtcttcggaaaagacacgcgcgtggaactgatctacgatgtt
gcccacaacatcgccaaagtggaggagtacgaaatagacggcaaacgaaaaaaactcgtt
gttcacagaaagggtgccacgcgctctcttggccctggaaacgaaaaagttccggaaatt
taccgggaagtgggacaacccgttatcataccgggtgacatgggaacggcttcctatctt
ctgatcggcaccagaaaggctgaggaaaagacgtttggatcgacagcacacggtgccgga
agggttctcggtagatccgccgctctgaagaggtggagttacagggagatcctcgacgaa
ctggaaagaaagaacatcatcgtcatgagcaaaagtaaaaaaacgctcgttgaagaagca
cccgaggcttacaaggatgtggacagggtcgtacacatcgtgcacgagataggtatctca
aggaagatagccagaatggtaccgctcggtgttgtgaaagggtga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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