KEGG   Pyrobaculum neutrophilum: Tneu_1563
Entry
Tneu_1563         CDS       T00682                                 
Name
(GenBank) Zinc finger TFIIB-type domain protein
  KO
K03124  transcription initiation factor TFIIB
Organism
tne  Pyrobaculum neutrophilum
Pathway
tne03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:tne00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Tneu_1563
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tne03021]
    Tneu_1563
Transcription machinery [BR:tne03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     Tneu_1563
 Prokaryotic type
  Archaeal type
    TFB
     Tneu_1563
SSDB
Motif
Pfam: TF_Zn_Ribbon TFIIB ZNF512_C2H2 zf-ribbon_3 Zn-ribbon_8 LysW-like_globular zf-RRN7 HTH_24 Cyclin_C Ribosomal_S27e OrfB_Zn_ribbon DUF1539 Elf1 Lar_restr_allev Zn_Tnp_IS1595 Cys_rich_CPXG Desulfoferrod_N
Other DBs
NCBI-ProteinID: ACB40487
UniProt: B1Y9T7
Position
complement(1386226..1387122)
AA seq 298 aa
MTRRLIFELEEYRCPTCGAVNDVAVDYERGQVVCRSCGTVLRESIADLGPEWRRPESSRA
HAGPVGSSLGDIEYGNIKIMDKLKAISLKKFARPLTTPLERVEIDIREFLDSAREKLNLH
PSIVEETVQLYKRLYEAGYRAPRLEGYAAALLFTLKSRGVAAVTPKTLYEQLGVDRSAFQ
SAYMELLKVANSLGLRPPRTDPKIYIPKIVAALGIGDEKTAEVLRIAVDILRYIMSSPRI
RNGRKPQVLAAAAVYYACYLAGVEVTQKELAKAADSTEGPVRELLKELSERLYIEITL
NT seq 897 nt   +upstreamnt  +downstreamnt
atgacgcggaggctgatttttgagctggaggagtaccgttgcccaacgtgcggcgcggta
aacgacgtcgccgtcgactacgagcgcggccaggtggtgtgtagaagttgtggcaccgtc
ctgagagagagcatcgcagatcttgggccagagtggaggaggcccgagtcctctagagcc
cacgcggggccggtggggtcctcgctgggggatatagagtacggcaatataaagatcatg
gacaagctgaaggcgataagcctaaagaagttcgccaggcctctcacgacgcccctcgag
cgcgtggagatagacatcagggagtttctggactccgccagggaaaagctaaacctacac
cccagcatcgtcgaggagaccgtgcaactctacaagaggctgtatgaggcggggtaccgt
gccccccggctggagggctacgccgctgctttgctctttacgctgaagagcagaggcgtc
gccgccgtcacgcctaagacgctctacgaacagctgggcgtagaccggtccgccttccag
tcggcgtacatggagttgctgaaggtagcgaacagccttggcttaaggccaccgcgtaca
gatcctaagatctacatacccaagatcgtggcggcgctcgggattggggatgagaaaacc
gcggaggttctccgcatcgccgtggatattctccgctacataatgtcgtctccgcgtatt
agaaacgggaggaagcctcaggtcctcgcagcggccgcggtgtactacgcctgctatcta
gcgggggtggaggttacccagaaggagctcgcaaaggcggcggactccaccgagggccct
gtcagagagctcctgaaggagctctccgagaggctctacatcgagataacgctttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (25)   

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