KEGG   Tetraodon nigroviridis (spotted green pufferfish): GSTEN00010189G001
Entry
GSTEN00010189G001 CDS       T04346                                 
Name
(GenBank) unnamed protein product
  KO
K10754  replication factor C subunit 1
Organism
tng  Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03030  DNA replication
tng03410  Base excision repair
tng03420  Nucleotide excision repair
tng03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tng00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GSTEN00010189G001
   03410 Base excision repair
    GSTEN00010189G001
   03420 Nucleotide excision repair
    GSTEN00010189G001
   03430 Mismatch repair
    GSTEN00010189G001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tng03032]
    GSTEN00010189G001
   03400 DNA repair and recombination proteins [BR:tng03400]
    GSTEN00010189G001
DNA replication proteins [BR:tng03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    GSTEN00010189G001
DNA repair and recombination proteins [BR:tng03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     GSTEN00010189G001
SSDB
Motif
Pfam: RFC1 BRCT AAA PTCB-BRCT AAA_22 BRCT_2 NTPase_1 AAA_30 AAA_16 nSTAND3 RuvB_N AAA_19 YcbB
Other DBs
NCBI-ProteinID: CAF94208
UniProt: Q4SYS4
Position
undetermined
AA seq 775 aa
MDRELWGSKEIPQGAENCLEGCVFVLTGVLESMERDETKSLIERYGGKVTGNISKKTTYL
VQGRDCGVSKLEKAESLGTKILDEDGLLELIRTKPGKKSKYEIAAEAEVGAHSIVSLTHK
ASKSTPTTQKISPSKGNSTSPHTPSPSKTSLGQGHTSRTREGRTPPGRGSAQTARRELSL
SSSNSSSSPAEAAVPRRTAGDEALLWVDKYRPRSLKAVIGQQGEQSCANKLLRWLQNWHR
HHGGGTLKAPAKTGKFGGKDDGSGYKAALLSGPPGVGKTTTASLVCEVSPCLSSGGKRVF
GVDGFLSLSLSVSSHAGFHGHLQELGFSYVEMNASCTRSKNSLKEVVAESVNNTSIENFY
RGTSQTVSSKHVLIMDEVDGMAGNEDRGGIQELIALIKGSKIPIICMCNDRNHMKIRSLA
NYCFDLRFQRPRVEQIKAAMMSIAFKEGIKNLAPALNEIILASNQDVRQVLHNLSMWTAT
DKVMSYDRCKADAAKARKDMKIGPFEVCRKVFSAGEEAAHMSLMDKSDLFFHDYSLAPLF
VQENYLNVRPAAAGGNLKSHLMLLSKTADSISDGDLVDRRIRSGQNWSLLPTQAIYASVL
PGELMRGYMSQFPSFPSWLGKNSSAGKHSRIVQELTAHMGLKTMSSRQAVNLDYLHYLRQ
ALLRPLQRSGAEGAGEAVQILDDYQLIKEDVDSMMEISVWGNQADPYSKLDSKVKAAFTR
AYNKEVHLTPYALLAVKKSRRGGGGESEGGGEDVDSQPQESEDEGESLQTDAMIK
NT seq 2325 nt   +upstreamnt  +downstreamnt
atggaccgagagctctggggatccaaggaaatcccgcagggtgcagaaaactgcctggag
ggctgcgtgttcgtgctgactggcgtccttgagtcgatggagcgggacgagaccaagtcc
ctcattgagcgctacgggggcaaggtgacgggcaacatcagtaagaagaccacctacctg
gttcagggcagagactgcggagtctccaaacttgagaaggcggagagtttgggcacaaag
atcctggatgaggatggtctgttggagctgatcagaaccaaaccaggaaagaagtccaag
tatgagatcgctgctgaggctgaggttggtgctcatagcatcgtgtcactaacacacaaa
gcctccaaaagcacccctacaacccagaagatttctccctccaaaggtaactccacctct
ccccacacccccagcccgtcaaagaccagcctgggtcagggccacacctccaggaccaga
gagggccggacaccgcccgggagaggttcggctcagaccgcgcgccgggagctcagcctc
tcctcctccaactcctcttcttcgcccgcggaggccgcggtcccccgacggacggcgggg
gacgaagctctgctgtgggtggacaagtaccgcccacgctccctgaaggctgtgattggt
cagcagggggagcagagctgcgctaacaagctgctgcggtggttgcagaactggcacaga
caccatggcggagggactctgaaagccccggcaaagaccgggaaatttggagggaaagac
gacggatcgggttacaaggccgctcttctgtccggacctccgggagtggggaagaccacc
acggcttccctcgtctgcgaggtcagtccatgtctctccagcgggggcaaacgtgtcttt
ggggtggacggctttctctctctctctctctctgtctcctctcacgctggttttcacggc
cacctgcaggagttgggcttcagctatgtggagatgaacgccagctgtactcgcagcaag
aacagcctgaaggaggtcgtcgccgaatcggttaacaacaccagcatcgagaacttttac
agaggcacgtcccagacggtgagcagtaaacacgtcctcatcatggacgaggtggatgga
atggccggcaacgaggaccgcggaggaatccaggagttaatagccctgatcaaaggctca
aagatccccatcatctgcatgtgcaacgaccgcaaccacatgaagatccgatcgctggca
aactactgcttcgatctgcgcttccagagaccacgagtggaacagataaaggccgccatg
atgtccatcgctttcaaggaggggatcaagaacctcgccccggctctgaatgaaatcatc
ctggcctccaaccaggatgtgcgacaggtgttgcacaacctcagcatgtggacggccaca
gacaaggtgatgtcctacgaccggtgcaaggctgacgccgccaaggctcgcaaggacatg
aagatcggtcccttcgaggtctgccggaaggtcttttccgcgggagaggaagccgcccac
atgagcctcatggacaagtccgacctcttcttccacgactactcgctagcgcccctcttt
gtccaagaaaactacctcaacgttcgtccagcagcggctgggggtaacctgaagtcccac
ttgatgctgctcagcaagacggccgattccatttccgacggagatctggtggaccggcgc
atccgctcgggacagaactggtccctgctgcccacgcaggccatctacgccagcgtgctg
cccggggagctcatgcgaggatacatgagccagttccccagttttcccagctggctcggc
aagaactcctccgccgggaaacactcgcgcatcgtgcaggagctgaccgctcacatgggt
ctaaagaccatgagcagcaggcaggcggtcaacctggactacctgcactacctgcgacag
gcgctgctgaggccgctccagaggagcggagcggagggcgccggcgaagccgtgcagata
ctggacgactaccagctcatcaaggaagatgtcgacagcatgatggagatcagcgtctgg
ggaaatcaggccgacccctactccaaactggactccaaggttaaagcagcattcacgcga
gcctacaacaaggaggtccacctgacgccatacgcgctgctagcggtgaagaagagccgt
cgcggtggaggcggagagtctgaagggggaggcgaggacgtggacagccaaccgcaggag
tccgaggacgaaggggaaagcctccaaacggacgctatgatcaaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (25)   

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