KEGG   Tetraodon nigroviridis (spotted green pufferfish): GSTEN00016172G001
Entry
GSTEN00016172G001 CDS       T04346                                 
Name
(GenBank) unnamed protein product
  KO
K17589  RB1-inducible coiled-coil protein 1
Organism
tng  Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:tng00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    GSTEN00016172G001
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tng01009]
    GSTEN00016172G001
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tng04131]
    GSTEN00016172G001
   03029 Mitochondrial biogenesis [BR:tng03029]
    GSTEN00016172G001
Protein phosphatases and associated proteins [BR:tng01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     GSTEN00016172G001
Membrane trafficking [BR:tng04131]
 Autophagy
  Autophagosome formation proteins
   ULK complex
    GSTEN00016172G001
Mitochondrial biogenesis [BR:tng03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-independent mechanism factors
    GSTEN00016172G001
SSDB
Motif
Pfam: ATG17_like TBK1_ULD ubiquitin
Other DBs
NCBI-ProteinID: CAF98458
UniProt: Q4SLM4
Position
15
AA seq 1535 aa
MKLYVFQVNNGSTLTFDTDLAVQTVLELKHAIQAKYKIAIQHQVLVVNGGECMVVERRVC
SYSAGTETNPIFLFNKEMILSDRDPTIPKTTFSIESEIQVKVEESLLMPAVFHTVASRTQ
LALEMFEVANKLSSFCERLVHDEHLQHQGWAAIMANLEDCTISYQKLLLKFETSYLNYQQ
DLEEIKTKLSKSVCVGARARLGMAVSVMARIPLLECLTQQSYRESMEKSSSTPEKDSDET
EEEEKSTDSVLRSSKTPSGEPEASEMADSGGLRAILDEAANPSCFNVTLLDWINVQDRPN
DVESVVRKCFDSINRVSGSRQGAVELLQRGPDLASSLQLDPRIIQPFLADCRDTIAKLDN
QNMKSIKGLEDRLYALDQMIASCKKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSH
TNQLMIMLNNHRKLLDIKKKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKVQALLRLL
TELMERVRAVEALSNVPQMYCLAVVEVVRRKMFMRHYREVRAWSRSPPPPPRFSASLPRL
WWHICLSSPSQWAYSLVKDGKLLYDAEKLKRESFGKLFRKSFLRNRLFRGLDSWPPKSFC
TQKPRRFDDELPDISVEDLQYLKSCCPAEVQPFLMVPALCDFEPLNRHVDALHHLVQAAQ
SVDEMSQTITDLLSEQRESYSRSSHRSTALTPQSESGPGTATSASSKTPPSLSLQGTSCQ
ALHVPVPAPLEDLSPDSIDAQTFDFETIGHPNMDPVLQQGSLDLDSLAESPESDFMSAVN
EFVIEENLTSPNPISVPTSPEMMVESLYSSVINAIDNKRMQDTTTLERENARVAALRRVI
DRYQSAAEETQAGVRSVRDDLCHLRTVVLKEQQDFALVMRSVSSEVRGVCQARQSQLRER
HQNELLSLRQELQKQVQTLTEENQVNQNIVRDVQRAMLELEGLLERKEKELVQLQSEKDQ
LAVLESQQRDLVLNLQQVTSSQAEEIRTLSASRGSLADQLKDLRSEIERSQKEIREKLEV
DKQTQLKELEDQLKRQHQAELERLGERNRKALEDLAAESGAKLCETLDQHASVLREKDRQ
IKDSECRGAELAELRCKLEVELALKESETEELRRSFEDAKAQQAEAVRSRVESETRDLSD
ELACVKKQLQAKNEEYEVDLSELRTLMRIEKDHCISELVDRYDEEAAALRGESTCLRERL
EDATRNHAEQWQKLRQEAEQEKGKQRSSFQELEQELRTVISNLQAENGLLSKKLDRHARE
KDSGEVLSSDALKDLQQQKDDTEKKLLEKIRQLEKELQGRQSSKSADAAAPRSLDSAIQE
HLQQERASLQSQMELLEKQKNEEIQNLKTSLIAEQQTNFNTVLTREKLKKEQVISELTEK
LRKVTQQQEKDKALIETLSEDRASVMQEKKHLEEELNRLRGATLVSSAFFATNPSGQELP
HAKAEAGARALPGGGACPSEPETDRLASVAAIREDEGVDSAVEASMVTVHENILMSEEKQ
RILLLERTLHMKEEENKRLSQRLVSSCCAVPQPPH
NT seq 4608 nt   +upstreamnt  +downstreamnt
atgaagttgtatgtgttccaggtcaacaatggcagcacgttgacattcgacactgacctt
gctgtccagaccgtgctggagctcaaacatgccatccaagccaaatacaagattgcaatc
cagcaccaggtcctggtggtcaatggaggcgagtgcatggtggtggagaggcgcgtgtgc
agctacagcgccggcaccgaaaccaaccccatattcctgttcaacaaagagatgatcctg
agcgaccgcgaccccaccatccccaaaaccaccttctccatcgagagtgagatccaggtc
aaggtggaggagtccctcctgatgccagccgtctttcacaccgttgcctcgcgaacacag
ctcgctctggaaatgtttgaagttgccaacaaactcagctccttctgcgaacgcctggtg
cacgacgaacacctccagcaccagggctgggcggccatcatggccaacctggaggactgc
accatctcctatcagaagctgctcctcaagtttgaaacctcctatttgaattaccaacag
gacctggaagaaatcaagacaaagctttcaaagtccgtgtgtgtgggcgcgcgtgcgagg
ttggggatggcggtgtccgtcatggcccggatccctctgctggaatgtctgacgcagcag
agttaccgagagagcatggagaagtccagctccacccccgagaaggattcggacgagacg
gaggaggaggagaaatccaccgattcggtgctgcgctcctccaagacgccgagcggcgaa
ccggaggcgagcgagatggccgacagcggcgggctgagggccatcctggacgaggccgcc
aacccgtcctgcttcaacgtcacgctgctggactggatcaacgtgcaggacagacccaac
gacgtggagtcggtggtccggaagtgcttcgactccatcaaccgggtgagtgggagccgc
cagggcgcggtggagctgctgcagagaggtcctgacctggcgtcctccttgcagctggac
ccccgcatcattcagcccttcctggctgactgccgcgacaccatcgccaagctggataat
cagaacatgaaatccatcaaggggctggaggacaggctctacgccctggaccagatgatc
gccagctgcaagaagctggtgaacgagcagaaagaacttgctcagggatttttggccaat
cagaagcgagctgagaacctgaaggacacgtccgttttgcccgacttgtgtctgagtcac
accaaccagctcatgatcatgctgaacaaccacaggaagctgctggatatcaagaagaag
tgcaccaccgccaagcaggagctggcaaacaacctccaagtccgactcaaatggtgctgc
tacgtgatgctccacgccgaccaggacggcgagaaggtccaggctctgctcaggctcctg
acggagctgatggagagggtgagggcggtggaggctctcagcaacgtgccccagatgtac
tgcctggccgtggtggaggttgtcaggaggaagatgttcatgcgccactacagagaggtc
agagcctggtcccggtccccccccccccccccccgcttctccgcctcactgccacggctg
tggtggcacatctgtctgtcctctccttctcagtgggcgtattcgctggtgaaggacgga
aaactgctctacgatgcggagaagctgaagagggaatcgtttggaaaactctttaggaaa
tctttcctccgaaaccggctgttcagaggactcgattcatggccgcccaagtctttttgt
acgcagaagcccaggaggttcgacgacgaactccctgacatctccgtcgaggacctgcag
tacttgaaatcatgctgccctgcggaggttcagcctttcctaatggttcctgccttgtgt
gactttgaacccttgaatcgccacgtcgacgccctgcaccatctggtccaagctgctcag
agtgtggacgagatgtctcagaccatcactgacctgttgagcgaacaaagggagtcctac
agtaggagctctcacagatcaaccgccttgacgccgcagtcggagagcggacctgggacg
gcgacatccgcgtcctccaaaacgcctccctcgcttagccttcagggaaccagctgccag
gcccttcacgttcctgtcccggctcctcttgaggacctctccccagacagcatagatgcc
cagacctttgactttgaaaccatcggccacccaaacatggacccagtgttgcagcagggc
tccctcgatctggattctctagcagagagtccggagtccgacttcatgtctgccgtcaac
gagtttgtgatcgaggagaacctgacctctcccaaccccatcagtgtccccaccagccct
gaaatgatggtggagtccctatactcatcagtgatcaacgctattgacaacaagcgcatg
caggacaccacaacgctggagagggagaacgccagggtggctgccctccgacgggtcatc
gaccggtaccagtcagctgcggaggagacccaggccggtgttcggagcgtgagggatgac
ctctgccacctgagaactgttgtgctaaaggaacaacaggactttgctttggtcatgagg
agcgtgagctccgaggtgcgcggcgtctgccaggcccgccagtcgcagctccgagagcgc
catcagaatgagctcctgtccctgcggcaggagctccaaaagcaggtccagacactaacg
gaggaaaaccaagtcaaccagaacatcgtccgggacgtccagcgtgccatgctggagctg
gaagggctcctggagcgcaaagagaaggaactggtgcagctgcagagcgagaaggatcag
ctggccgtgctggagagccagcagagggatctggtcctaaacctgcagcaggtgaccagc
agccaggcggaggagatcaggacgctctcggcctccaggggctccctggccgaccagctg
aaggatctgcgctctgagatcgaacgcagtcagaaagagatccgggagaagctggaggtt
gacaagcagacccagttgaaagagctggaggaccagttgaaacggcaacaccaggcggag
ctggagcgcctgggtgagcgcaaccgcaaggccctggaagacctggctgctgaaagtggc
gcaaagctgtgcgagactcttgatcaacacgccagcgtgctgagagagaaggaccggcag
atcaaagactcggagtgtcgcggcgccgagctggccgagctccgctgcaaactggaggtg
gagctggccctgaaggagtcggagacggaggagttgaggcggtcgttcgaggatgccaag
gcgcagcaggccgaggccgtgaggtcccgggtggagtcggagaccagagacctgagcgac
gagctggcctgcgtcaaaaaacagctgcaggccaaaaacgaggagtacgaagtggacctg
tcggaactgaggaccctcatgaggatcgagaaggaccactgcatctccgagctggtggac
aggtacgacgaggaggccgccgcgctgcgcggcgagagcacctgcctccgcgagcgactg
gaggacgccacgaggaaccacgccgagcagtggcagaagctccggcaggaggccgagcag
gagaaaggaaagcagcggagcagtttccaggaactggagcaggagctgaggactgttatc
agcaatttgcaggcagaaaacggcctgttgtccaaaaaactggacagacacgcgcgtgaa
aaagactcgggggaggtcctgtcatcagatgccctcaaggacctacagcagcagaaggac
gacacggagaagaagctattggaaaagattcgacaactggagaaggaacttcaggggagg
cagtcctcaaaaagcgccgacgccgcagccccccggtccctggactcagccatacaggag
cacctgcagcaggaacgggcttcgctgcagtctcagatggagctcctggagaagcaaaag
aacgaagagatccagaacctcaaaacctctctcatcgctgaacagcagactaatttcaac
accgttctcacccgggagaagctgaagaaagagcaggtcatcagcgaactgacggagaag
ctgcgaaaagttacccagcagcaggagaaggacaaagccctgatcgagacgctgtccgag
gaccgagccagcgtcatgcaggagaagaagcatctggaggaggagctgaaccgcctccgc
ggcgccacgctggtctcttccgccttcttcgccaccaacccctcagggcaggagcttccg
cacgccaaagcggaagcgggagcccgagccttgcccgggggcggggcctgtccctccgag
cccgaaaccgacaggctggcctccgtcgcagccatccgggaagacgaaggggtggactcg
gcggtggaggccagcatggtcactgtccatgagaacatcctgatgtcagaggagaaacag
cgcatcctcctactggagaggactttacacatgaaagaggaggagaacaaacgcctcagc
cagagattggtgagttcctgctgtgctgttccacagccgccccactag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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