KEGG   Tetraodon nigroviridis (spotted green pufferfish): GSTEN00017070G001
Entry
GSTEN00017070G001 CDS       T04346                                 
Name
(GenBank) unnamed protein product
  KO
K10840  centrin-2
Organism
tng  Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tng00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    GSTEN00017070G001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tng03019]
    GSTEN00017070G001
   03036 Chromosome and associated proteins [BR:tng03036]
    GSTEN00017070G001
   03400 DNA repair and recombination proteins [BR:tng03400]
    GSTEN00017070G001
Messenger RNA biogenesis [BR:tng03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     GSTEN00017070G001
Chromosome and associated proteins [BR:tng03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    GSTEN00017070G001
   Centrosome duplication proteins
    Centriole replication proteins
     GSTEN00017070G001
DNA repair and recombination proteins [BR:tng03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      GSTEN00017070G001
SSDB
Motif
Pfam: EF-hand_7 EF-hand_1 EF-hand_6 EF-hand_8 EF-hand_9 EF-hand_5 AIF-1 EF-hand_4 Dockerin_1 SUB1_ProdP9 EF-hand_14 SurA_N_3 RPN1_RPN2_N SurA_N_2 HerA_C RTP LETM1_RBD DUF5580_M SRI MJ1010-like_2nd
Other DBs
NCBI-ProteinID: CAF99106
UniProt: Q4SJS6
Position
1
AA seq 157 aa
RKKTAPKPELTEEQKQEIREAFELFDTDGSGYIDIKELKVAMRALGFEPKKEEIKKMISD
VDKDGTGKISFADFLSVMTQKMAEKDSKEEILKAFRLFDDDETGKISFKNLKRVAKELGE
NLTDEELQEMIDEADRDGDGEVNQEEFLRIMKKTCLY
NT seq 471 nt   +upstreamnt  +downstreamnt
cggaaaaagacagcccccaaaccagagctgacggaggagcagaagcaggagatcagggag
gccttcgagctgtttgacaccgacggatccggatacatcgacatcaaagagctgaaggtt
gcgatgagagctctgggattcgaaccgaagaaggaggagatcaaaaagatgattagcgat
gtggacaaggatggaacaggaaaaatctcctttgctgacttcctctctgtcatgacacag
aaaatggcagagaaggactccaaagaggagatcctaaaagctttcaggctattcgatgac
gacgagacgggcaagatctcgttcaagaatctgaaaagagtagccaaggagctgggagag
aaccttacagacgaggagctgcaggagatgatcgatgaagcagacagggatggagatgga
gaagtgaaccaggaggagttcctgcgtatcatgaagaaaacctgcctttac

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (20)   
   Pfam (20)   
All databases (30)   

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