KEGG   Trichoplusia ni (cabbage looper): 113492130
Entry
113492130         CDS       T05757                                 
Name
(RefSeq) zinc phosphodiesterase ELAC protein 2 isoform X1
  KO
K00784  ribonuclease Z [EC:3.1.26.11]
Organism
tnl  Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:tnl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tnl03016]
    113492130
Enzymes [BR:tnl01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     113492130
Transfer RNA biogenesis [BR:tnl03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    113492130
 Prokaryotic type
    113492130
SSDB
Motif
Pfam: Lactamase_B_4 Lactamase_B_2 Lactamase_B
Other DBs
NCBI-GeneID: 113492130
NCBI-ProteinID: XP_026725254
UniProt: A0A7E5VAF5
Position
3:15830227..15847098
AA seq 1408 aa
MYGISVLFSCRVVSYRSTHFYSSDSTKKLLEFLADMPKATSSRIAEAQRQRQQISKKSEK
YGPSTVYLQVLGSGARGAPNTLYLFTDQKRYLFNCGECTQRLAHEHKVKLSRLDHIFITS
KTWRNIGGLPGLSLTLQDVGVPNITLHGPEGLDELYNATRRFVIMKDMNVTMAKCSNSED
FEDNVMNVKYVLLGPHDNLLTGKDLKSGTRKPKSETNSDKEYEEFSHDDTDYYRPEVRTL
EPKAKFVKERERPKVKPVQDRDPQKKKTEKVLHELQKKTHCSVAYICTLKKRLGTLDLAK
CVELGVKPGPMLGQLKNGQDVVLPDGSLVLSKDVKTPDDPGPVFIVLDVPDLSYLKEAEF
SSHFDNDTNPPENIPTLIVHFTPPHVFHHPTYRSFMAMFGPCTRHLILNHQNSCLGSEAV
HRTQHKLHLLDPDIFPLLRDVSVPAVWNAHPPVPKTNSPVRLKGLEELKNKIALAQFQNI
INLEGSAKGDGHPVAVEECDSVSKLELLAGRTLTMYHLRPKRQLDRTAEPKLHIQDYIQE
TMDVDGFVGSLEQFRRLVDSMRYAKSDAKEYPKVVFLGTGSCIPSKTRNTSAIVVHVSED
RSILLDCGEGTFGQLVRFYGPKKVNAFLRTLKAIYISHLHADHHIGLIGVIQARRQAIEE
TGEASPPLYLLAPGQIVTWLTLYDHQFERLRNDYTLIPNQSLLHDHPSQNVDMTSAVLAS
LGVAGMKTCLVAHCPNAFGVAIDVDDQHKITYSGDTLPCEELVKIGENSTLLIHEATMED
ELADEARTKMHSTTTQAIEIGRQMNARYTLLTHFSQRYARLPRLNAHILNDNNSVGIAFD
NMQITMSDLELLPHMYAPLQLMFAEHCVEMELKAAQRQRHRERRTSSPSLPPETPMDRQR
SESRTRRNAACRAASSAPAPHARYRESNASRLRQEIKGMTITGTVRKPRSRSNSASASPP
PPESRKSPARAASRQPSNERPKPKTDQQQPPPTPKEQEKEKPIDMESTPRSMSNTSDFSR
DTATSAKISVNSSGYTVDSARSKDTSHPPTAEEVMDIMSNASSKRSSGPPSRTGPIESHE
VIRRCGYGKPLVTPVNKKLTIRRDLPWPPVTNPSRDKVTNNIGRTKSPTRAWKAENRESP
PPTTPQRPECLRSKIPTKATVSGNKLRASNTSPNVFPDTKIPIMRSNIGARSLRTSVSSL
HRSNSRSPTRPPKSAGKNPQDVSSSPTIKMKPAHTVLNGLHDHREVKNHSPDCQKTPPRS
PNRGRSPIQAKRTLPELKKPGSPKKALPSQGVRERQKSSVNSDGAAPEMHHSHPVRPNPT
GHSNRSFKPQLEDIKSSYLLLNKKPQDLTIKACANSAKKKPHVPRLNPVTEEVRKQQLTE
VKQKFQSKHFWIESKYDKIEGLNWISWK
NT seq 4227 nt   +upstreamnt  +downstreamnt
atgtacggtataagtgtattgtttagttgccgagtagttagctatcgtagcacacatttt
tattcgtctgatagtactaagaagctgttggaatttctagccgatatgccgaaagcgact
tcttcacgaatcgctgaggcgcaacgtcaaaggcaacaaatatctaaaaagtctgagaag
tatggccccagcacggtataccttcaggtactgggttcgggcgcgagaggcgcgccgaac
acgttgtacctcttcactgatcaaaagcgatatctatttaactgtggtgagtgtacacaa
aggctggcccatgaacacaaggtaaagctttcaagacttgaccacatatttatcaccagt
aaaacctggagaaacattggaggcctgccgggcctgtcgctcactctacaggatgtcgga
gtaccaaatatcacattacatggacctgaaggcttggatgagttgtataatgcaactcgg
cgctttgtcatcatgaaggatatgaatgtaaccatggcaaagtgcagtaacagtgaagac
ttcgaagacaatgttatgaatgtcaaatatgtgttactaggcccccatgataacctactg
acaggtaaagatttgaaatcaggaactaggaaaccaaaatcagaaactaactctgataaa
gaatatgaagaattcagtcatgatgacacagactactataggcctgaggtccgaaccttg
gagcctaaagctaaattcgttaaagagagggaaagacctaaagtaaaacctgttcaagac
agagatccacaaaagaaaaagactgaaaaagttctacatgaactgcaaaagaaaacccac
tgttctgttgcctacatttgcacattgaagaaacgacttggaacccttgacttggcgaag
tgtgttgagctaggcgtcaaaccaggcccgatgctaggccaactgaagaacggccaggac
gtggttctgcctgatggatctcttgtactctccaaagatgttaagacgcctgatgatcct
gggcccgtgtttatcgtattggatgtaccagacctatcgtatctaaaggaggcggagttc
tcatctcacttcgataacgacaccaatcctccagagaacatccccacacttattgtgcac
ttcacgcctcctcatgtgtttcatcatccaacgtaccgttccttcatggctatgttcggg
ccgtgcactcgacacttgattctgaaccatcagaactcgtgtctcggttccgaagcggtc
caccggacacagcacaagctgcacctactcgaccccgacatcttcccgctgcttcgtgac
gtcagtgtgcctgccgtgtggaacgcgcatccgcccgtaccgaaaacgaatagtcctgtg
cgattgaaagggctcgaagagttgaagaataagatagcgctcgcgcagttccagaacatt
attaacctggaggggtcagctaagggcgacgggcatcctgtggccgtggaagaatgcgat
tccgtttccaaactcgagctgttggcgggacggacgctcaccatgtaccatttgaggcca
aagaggcagctcgacaggactgcggaaccaaagctccacattcaggactatattcaggag
acgatggatgtggacgggtttgttggaagcttggagcagttccgacgcctggtggatagt
atgagatacgcgaagagcgacgctaaggagtaccccaaggttgtattcttgggcacgggg
tcctgtatacccagtaaaacgaggaataccagcgctattgttgtgcatgttagcgaagac
cgttcgattttgctggactgtggtgaaggcacattcggacagttagtgcgcttttatgga
ccaaagaaagtcaacgctttccttagaactttgaaggctatttacatttcgcatttgcac
gcagatcaccatattggtctcattggtgtgatccaagcccgccggcaagctatagaggag
acaggggaagcttcgccgccgctgtacctgctcgcgcccggacagattgtcacctggctc
acgctctacgaccatcagtttgaacggctcaggaacgactacaccctcattcctaatcag
agcttgctacacgaccatccatcacaaaatgttgacatgacgtcagcagtactggcgtcg
ctgggcgtggccggaatgaagacgtgtctagtagcgcactgtcccaacgcgtttggcgtc
gcgatagatgtggacgaccaacacaagatcacttactccggggatacgctgccctgcgaa
gaacttgttaagatcggtgaaaactccaccctattaatccacgaagcgacaatggaagat
gagctagccgacgaagcccgaactaagatgcactctacaacgacgcaggcaatagagata
gggcggcagatgaacgcgcggtacacactactcacgcacttcagtcagcggtacgcgcga
ctgccgcgcctgaacgcgcacatactcaacgataataacagtgtggggatcgcttttgac
aatatgcagatcacgatgagcgacctggagctgctacctcacatgtacgcgccgctgcag
ctgatgttcgcggagcactgcgtggagatggagctgaaggcggcacaacgccagcgccac
cgcgagcgtcgcacgtcctcgcccagcctgccgcccgagaccccgatggaccggcagcgc
tcggagtcccgcacccgacgcaacgccgcctgccgcgccgccagctcagcgcccgccccg
cacgcgcgatacagggagagcaatgcttcgcggctgcggcaggagatcaagggcatgacg
ataacgggtactgtccgaaagccgaggagcagaagcaactctgcctcggcatcgccgccg
ccgccggagtcgcgcaagagtccggcgcgggcagcatcacgacaaccaagcaacgagcgt
cctaagcctaagacagatcaacagcagccaccgcctaccccgaaggaacaagaaaaggaa
aagcccatagacatggagtcaacacctcgttcgatgagcaacacttcggacttcagtaga
gacaccgcgacttcagcgaagatttcagtcaactcttcgggatacactgtcgattcagcg
cgatcgaaggacacatcgcacccgcccacggctgaggaagtaatggacatcatgagcaac
gcgagctctaagagaagttccgggcctccatcacgtactggtcctatagagtcgcatgaa
gtaattcgccggtgcggctacggcaagccactggtgacacctgtaaataaaaagctaact
ataagaagagacctgccatggccgccggtcacgaacccgagccgggataaggtcacaaat
aatattggtcgtacgaaatcccccacaagggcatggaaagcggaaaacagagagtctcct
cctccaactactccgcaacgacctgagtgtttaagatctaaaatacccacgaaggccact
gtatccgggaacaagttacgggcatcgaatactagtcccaatgtctttccggatactaaa
ataccgatcatgagaagcaatattggtgctagatcattacgtacttccgtatcatctctg
catagatctaatagccgaagtcctacgaggcctccgaagtcagcgggcaaaaaccctcaa
gatgtatcaagttctcctacaataaaaatgaagcctgctcatactgttctcaacggtctc
cacgatcatcgcgaagtcaagaaccatagcccagattgccaaaaaacgccgccacggtcg
ccgaacagaggtagatcgcctatacaagcaaagcgaaccttgccagaactcaaaaaacct
ggtagtcccaaaaaggcgttaccatcccaaggtgtgagagaaagacaaaaaagttcggtc
aatagcgatggagctgcccctgaaatgcatcactctcatcccgtcagaccgaatcccaca
ggccacagcaatcggagcttcaaaccccagttggaagacataaagagttcctaccttttg
ttaaacaaaaagccccaggatcttaccataaaagcttgtgctaattccgcaaaaaaaaaa
ccacatgtaccaagattaaaccctgtaactgaggaagtgaggaaacaacaactcacagaa
gtaaaacaaaaatttcaaagtaaacacttttggattgaatcaaaatatgacaaaattgaa
ggactcaactggatctcatggaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

Download RDF
DBGET integrated database retrieval system