KEGG   Trichoplusia ni (cabbage looper): 113506324
Entry
113506324         CDS       T05757                                 
Name
(RefSeq) endoribonuclease Dcr-1-like
  KO
K11592  endoribonuclease Dicer [EC:3.1.26.-]
Organism
tnl  Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:tnl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tnl03036]
    113506324
Chromosome and associated proteins [BR:tnl03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    113506324
   microRNA pathway
    RISC loading complex
     113506324
SSDB
Motif
Pfam: Ribonuclease_3 Ribonucleas_3_3 Dicer_dimer Dicer_platform PAZ Dicer_dsRBD dsrm
Other DBs
NCBI-GeneID: 113506324
NCBI-ProteinID: XP_026744968
UniProt: A0A7E5WVU7
Position
10
AA seq 1162 aa
MTLYKEFQETEQLIQRILVGNTDDRDEPAQENIDKNLYQDEDVPPFISPYGGRLTATSAI
SLLNRYCSMLPHDHFTIITPMWIKETVTNKHGFDCNLVTIVLPIACPIKEEIKGMPMYNL
KSAKRSAALNACVKLYEAGELDPLTMLPMRYTAVDFDDADVQSCFLNWRNDDMKRVDDPD
YPAPGTKGRVRKHRIQFPAVLDSVPDESEYYLHIIKTTTAFAEPKDTREKALYDLLHRPE
GFGFMTQKPLPAICDFPMFMTVGEVSTSLDVNYAVIKLDAKLLQLVKQFHFFIFEQVLAI
AKKFIVFEGKVNCLYVVPVKEDNGYNIDWDVMATHDQIQPVTPPPYEDRINLKVTPENYK
DCVVTPWYRVLPDRYIVSRVLEFMTPQSHFDSDSYVTFADYYADKYKLEIIGDKSQALLE
VRNISSRMNCLLPRAATINSFTDKQKKLVSASQGDDKTNRGFAEVFVAEFCIKYDFPGVL
WYKAIMLPSIVHRVFMLLVAHELLTEISESTKYGNPKRRKGEEWRPVSSNMQIATLSLLA
QVEEPTPITSVDRINNPTDDENPRRPNIMSIKQSLYQLQQKKLSKDYPWDEKMEPIDIER
NLSTVTVMDIECYDEFVSSPLVPIMSPTRVLSPPRVVVGSKISAAISAPPAKYNDKLNIL
KMTATGNGPELRDILTALTTIKSHDTFNLERVETLGDAFLKFAASLYLFHKFPKFNEGQL
TNIKGRLISNRNLYYAGERFNLAGRMKVEQFSPRKDFMVPGYFAPPEVEKFIAEKKLRPT
FLIGVYFPSSEAFDGNLSKESMAMVRDRFADCDGTAETEPECRVQNAMQLYIHSQAVADK
SVADCVEALIGTYLLSGGVLGAIKVIEWMRIIPPQDNFATYLHTRVSTVLSEKRATESDI
NFLLSHCRPDVEKILNYKFKDPSHLLEALSHPSYIRNRLTRSYERYEFLGDAILDFLITS
HVFENCGDLKPGEMTDLRSALVNNVTFASYVVKLGLHKFLCSELNPTLDKAVITFVDHQV
QREHQIVEDVLYLIDEEECHIAEYVEVPKVLSDIFEALVGAIFLDSGGDLQTVWALVYRI
MCKEIHAFSSRIPQQPVKVLYEKIHACPVFDKSVVIDPDIPKIKVGVTITKNDWQHTVYG
VGKNKSQAKRAAAKMALKVLGI
NT seq 3489 nt   +upstreamnt  +downstreamnt
atgactctttataaggaatttcaagaaacagaacaactcattcagcgtatattagttggc
aacactgatgatcgtgatgaaccagctcaagagaatatcgacaagaacctgtatcaagat
gaagatgtaccaccatttatatcaccgtatggaggtcgcctaacagccacatcagctata
agcttactcaaccgctactgttcgatgttgccacacgatcattttactattataacgcct
atgtggataaaggaaactgtaaccaataagcatggatttgattgcaatctcgttactatc
gtattgcccatcgcttgccctattaaggaggaaataaagggaatgcccatgtacaattta
aagtcagcgaaacggtcagctgctctcaatgcttgcgtgaaactgtatgaggcgggagag
ttggaccccttgacgatgctgccaatgcgttacacggcagttgacttcgatgatgctgat
gtgcagtcatgctttttaaattggcgcaacgatgacatgaagcgggtggacgaccccgac
tacccggcgcccgggactaagggaagagtgcgcaagcataggatacagttccccgcagta
ttagacagcgttcccgatgaaagcgaatactacctacatataataaagactacaacagca
ttcgcggagcccaaagatacgcgggaaaaagcgctgtacgacctccttcatagacctgaa
ggattcgggtttatgacacagaaacctttgccggcaatatgtgactttccaatgttcatg
actgttggtgaagtatcaacgtcgttggatgtaaattatgcggttataaagttagatgcc
aagcttcttcagttggttaaacaattccatttcttcattttcgagcaagttttagccatt
gcaaagaaatttattgttttcgagggtaaagttaactgcttgtatgttgtgcctgtgaag
gaagataatggatacaatattgattgggatgtaatggccacacatgatcaaatacaacct
gtaacgccgccgccgtatgaggacaggattaatttaaaggtgaccccggaaaattacaag
gattgcgttgtcactccgtggtaccgagttctaccggataggtatattgtgtcacgagta
cttgaattcatgactcctcagtctcatttcgattcagattcatacgtaacgtttgctgat
tattatgcagataaatataagttagaaattatcggtgataagtctcaagctctgttggag
gtacgaaatataagctctaggatgaattgcctgttgcctagagcggcaacaataaattcc
tttacggataagcagaagaagctagtgtccgcatcacagggcgatgataaaaccaataga
ggttttgctgaagtatttgtagcagagttctgtatcaagtacgactttccaggagttctg
tggtacaaagctattatgctgccaagtatagtgcacagagtattcatgctattggttgca
catgaactactgactgaaatttcagaaagcacaaagtacggaaatccgaaacgcagaaaa
ggcgaagaatggcgaccggttagttcgaatatgcagatagctacattgtcgctactggct
caagttgaagaacccactcccatcacatctgtggacagaattaacaacccgactgacgat
gaaaacccgcgtcgaccaaacataatgtcgataaagcaaagcttgtatcaactgcagcag
aagaaactcagcaaggattacccttgggatgaaaaaatggagccaatagacatcgagcgc
aacctatcgacagtgacagtgatggacatcgagtgttacgacgagttcgtgtcgtcgccg
ctagtacccatcatgtcgcccacgcgcgtactgtccccgccgcgagtagtagtgggcagc
aagatatctgcggctatctccgcgccgcctgccaagtataacgacaagctcaatatatta
aaaatgactgctaccggtaacgggcctgagttacgtgatatactgactgcgctaacaacc
atcaagtcacacgataccttcaatttggagcgagtggagacactgggcgatgccttcttg
aagttcgctgcgagcctctacttattccacaagttccctaaattcaatgaggggcagttg
acaaacatcaaaggaagattaattagcaacaggaatctatactacgctggagagcgcttc
aacttggctggacgtatgaaggtcgaacaatttagtcctagaaaagactttatggtgcct
ggatacttcgcaccaccagaagttgaaaaattcattgcggagaaaaagcttcgtccgaca
ttcctcataggtgtttacttcccttcatcagaagcttttgatggcaacttgtcaaaggag
agcatggcaatggtacgagaccgatttgcggactgcgacggtactgcggagaccgaaccg
gaatgtagagtgcagaatgccatgcagctgtatattcactcacaagcggtggccgataag
tctgttgctgattgcgtggaagcactcatcggtacatacttgctaagcggcggcgtttta
ggcgctatcaaagtcatcgagtggatgagaatcatacccccacaggacaactttgcgaca
tatttgcatacacgagtctcaacggttctgtcagaaaagcgggctacagaatcagacatc
aatttcttattaagtcattgcagaccagacgtcgagaaaatccttaactacaagtttaaa
gatccatcacatttgcttgaggctttatctcatccatcatacatacgaaaccgattgact
cgttcttacgaacgctacgagttcctcggcgatgcgatactggacttcctaataacatcc
cacgtgttcgagaactgtggcgatctgaagcccggagaaatgacggaccttaggtctgct
ctcgtcaataacgtcactttcgcgtcttacgtcgttaaattgggactgcacaaattcctg
tgctcagaattaaatccgacgctagacaaggccgtcatcaccttcgttgatcaccaagtg
caacgcgaacaccaaatagtagaagacgtactctatctgattgatgaggaggagtgtcat
attgctgaatatgttgaagtacctaaggtacttagcgatatctttgaagcgttagttgga
gcgatattcctggacagcggcggtgacttgcagactgtctgggcattggtctatcgcatc
atgtgcaaggaaattcacgccttctccagtcgcataccgcaacagccagtgaaagtgctc
tacgagaagatacatgcatgtcctgtttttgataaatcagttgtgatagatcctgacata
ccgaaaataaaggttggtgttactatcacgaagaacgactggcagcacaccgtgtacgga
gtcggcaagaacaaatctcaagccaaaagagccgctgccaaaatggcgctcaaagtctta
ggcatttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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