KEGG   Thermodesulfobium narugense: Thena_0127
Entry
Thena_0127        CDS       T01488                                 
Name
(GenBank) histone family protein DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
tnr  Thermodesulfobium narugense
Brite
KEGG Orthology (KO) [BR:tnr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tnr03032]
    Thena_0127
   03036 Chromosome and associated proteins [BR:tnr03036]
    Thena_0127
   03400 DNA repair and recombination proteins [BR:tnr03400]
    Thena_0127
DNA replication proteins [BR:tnr03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    Thena_0127
Chromosome and associated proteins [BR:tnr03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    Thena_0127
DNA repair and recombination proteins [BR:tnr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      Thena_0127
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_1 HU-CCDC81_euk_2 Calpain_III
Other DBs
NCBI-ProteinID: AEE13778
UniProt: M1E5M5
Position
137696..138016
AA seq 106 aa
MRKTDLINAVAEKCKGMTKKDCTVVVEAVFDSIKDALKRNEKVQLIGFGTFEVRERKERK
GRNPRSKEEIVIPAMKTPGFKAGKALKEAVQPKKAEKKPVKGAKKK
NT seq 321 nt   +upstreamnt  +downstreamnt
ttgagaaagacagatcttattaatgcagttgctgaaaagtgtaagggtatgaccaaaaag
gattgcacagttgtagtggaagccgtttttgattctattaaggatgcccttaaaagaaac
gagaaggttcagctaattggttttggtacctttgaggttagagagagaaaggagcgaaag
ggcaggaacccaagaagcaaggaagagatagttatacctgccatgaagactccaggcttt
aaggccggaaaggctttgaaggaggcggtccaaccaaaaaaagctgagaaaaagcctgtt
aagggcgcaaagaaaaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

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