KEGG   Thermodesulfobium narugense: Thena_0969
Entry
Thena_0969        CDS       T01488                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
tnr  Thermodesulfobium narugense
Brite
KEGG Orthology (KO) [BR:tnr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tnr03032]
    Thena_0969
   03400 DNA repair and recombination proteins [BR:tnr03400]
    Thena_0969
Enzymes [BR:tnr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     Thena_0969
DNA replication proteins [BR:tnr03032]
 Prokaryotic type
  DNA Topoisomerases
   Thena_0969
DNA repair and recombination proteins [BR:tnr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Thena_0969
SSDB
Motif
Pfam: Topoisom_bac zf-C4_Topoisom Toprim Zn_ribbon_recom DNA_ligase_ZBD DUF1272 zf_Rg DnaJ_CXXCXGXG
Other DBs
NCBI-ProteinID: AEE14598
UniProt: M1E7D1
Position
complement(967790..969970)
AA seq 726 aa
MSESKKKVMIVESPSKTKTLSKILGKSLKILASKGHVRDLPKTRLGIDIDNNFEPTFRIM
KEKSKLIEDLRKEVKDAKIVYLAPDPDREGEAIAWHLKEVLNLKDGQYKRVYFNEITEKA
VKEAMKQPRDLDTKLIEAQKARRILDRIIGYKISPFLWKTLQRGLSAGRVQSVALRMVVE
REREIRNFEIKKYYTFQIKCLDDNNKEFTLKLCDKKYNPVKFFDENEAEEVLKRLDGAKL
AIKSLETKEKKKSSPFPFITSTLQQEAQKKHGFSLKKTMKLAQSLYEGLQIGPEGSTGLI
TYMRTDSFNVSLEAQESAKELIIKLFGEDFYKKYYPKKNKGSQEAHEAIRPTSVFRLPDE
IKQYLGKEYYLLYDLIWKRFMASQMANAIYDSLEIKGEAKNYNFFARFLNLKFPGYMVLW
DEEKETEENDEVFPKLTEGKLYEIISIDKIEGFLSPPPRYTEATLVKRLEELGIGRPSTY
APTIITLQERNYVRKEGKILIPTKIGEEVTDILIKYFPNIVDYEFTAKMESDLDKVFNEE
DRVKLLKNFYQPFEMSLHNFEETSSEVLSSLASEKKCPICGSDMKLRISKFGRFYSCSRY
PECKGKLPFEDSSNSEQNSNEESLKKNEIDVKESDVECPICGSKMVEKRSKFGKFLACSR
YPECKGTLPYGKKVEQRCPKCGGQLIRTFSKKGKPYYKCVNKDCDFYSFKLPGISENLKV
EEPIKE
NT seq 2181 nt   +upstreamnt  +downstreamnt
atgtctgaaagtaagaagaaagtaatgattgttgagtctccatcaaaaacaaaaactctt
tctaagattcttggcaagtctttaaagattttagcatcgaagggtcatgttcgcgacttg
ccaaaaacgagacttggtattgatatagataacaattttgaaccgactttcagaattatg
aaagagaaaagtaaacttattgaggatttaagaaaagaggtgaaggatgcaaaaatagtt
taccttgctccagatcctgatagggagggcgaggcaatagcatggcatttaaaagaagtc
ctcaatttaaaggatggtcaatacaaaagagtttatttcaatgaaattactgaaaaggct
gtaaaagaagcaatgaagcagccaagagatttagatacaaaacttattgaagcacaaaag
gcaagaaggattttagatagaataataggatacaagatatctccgttcctctggaaaact
cttcaaagagggctttctgcaggcagagtccaatcagttgcgctaaggatggtagttgag
agagaaagagaaataagaaattttgaaataaaaaaatattatacctttcagatcaaatgt
ttagatgacaacaacaaagagtttacattgaagttatgtgataaaaaatataatcctgta
aaattttttgatgaaaatgaagctgaggaagttcttaaaagattagatggagcaaaactt
gctataaaaagtttagaaacaaaagaaaagaaaaaaagttccccctttccttttatcact
agcactcttcagcaagaggcgcaaaaaaaacacggttttagcttgaagaaaacaatgaaa
ttagctcaatcattatacgaaggtcttcaaattggtcctgaaggaagcacaggattaatt
acatatatgagaacagattctttcaacgtttctcttgaagcacaagaaagtgcaaaggag
ttaattataaaattattcggagaagacttttataaaaaatattatccaaaaaagaataaa
ggcagtcaggaagcacatgaagctataagacccacttcggtttttagattgccggacgaa
ataaagcagtatcttggtaaagaatattatcttttatacgatctcatctggaaaagattt
atggcaagccagatggcaaacgcaatctatgattctcttgagattaaaggtgaagccaaa
aattataattttttcgccaggtttttaaatttaaaattccctggatatatggttttgtgg
gacgaagaaaaagaaactgaagaaaatgatgaagtttttcctaaattaacagagggaaag
ctttatgaaataatttctattgataaaattgaaggatttctttccccacctcctagatat
actgaggctactcttgtaaaaagattagaagagcttggtattggtaggccttctacatat
gcacctactatcatcactcttcaagagagaaattatgttagaaaggaggggaaaatttta
attcctacaaaaattggtgaagaagtaacagatatattaattaaatactttcctaacatt
gtggattatgaatttactgcaaaaatggaaagcgacctagataaagtttttaatgaagag
gatagggtaaaacttcttaagaatttttatcaaccgtttgaaatgagtcttcataatttt
gaagaaacttcaagtgaagttcttagctctttggcttcagagaaaaaatgcccaatatgt
ggttctgatatgaaactaagaattagtaaatttggcagattttactcttgctcaagatat
ccagagtgtaaaggcaaattaccctttgaggactcttctaatagtgaacaaaatagcaat
gaagaaagtttgaagaaaaacgaaattgatgttaaagaatcagatgttgaatgcccaata
tgtggcagcaaaatggttgagaagagaagcaaatttggaaagtttttagcttgctcaaga
tacccagaatgtaaggggactcttccttatggaaagaaggttgaacaaaggtgtccaaag
tgtggtggtcaattaattaggacttttagtaaaaaaggcaaaccatattataagtgtgtg
aataaggattgtgatttttatagtttcaaactaccgggtattagcgaaaaccttaaggtt
gaagaacctataaaagaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (49)   

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