KEGG   Thermosediminibacter oceani: Toce_0096
Entry
Toce_0096         CDS       T01289                                 
Name
(GenBank) DNA polymerase III, alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
toc  Thermosediminibacter oceani
Pathway
toc03030  DNA replication
toc03430  Mismatch repair
toc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:toc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Toce_0096
   03430 Mismatch repair
    Toce_0096
   03440 Homologous recombination
    Toce_0096
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:toc03032]
    Toce_0096
   03400 DNA repair and recombination proteins [BR:toc03400]
    Toce_0096
Enzymes [BR:toc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Toce_0096
DNA replication proteins [BR:toc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Toce_0096
DNA repair and recombination proteins [BR:toc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Toce_0096
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon DUF655 DUF4537
Other DBs
NCBI-ProteinID: ADL06887
UniProt: D9RZI9
Position
complement(98004..101189)
AA seq 1061 aa
MAFCHLHVHSEYSLLDGLCRLPLLVKKAAELAMPALALTDHGGLYGMVPFYRLCLEAGIK
PILGCEVYVVEDVTCRWGKESFHHLVLLSENQEGFKNLLSLVTRSHVDGFYYRPRVDKKL
LASHAKGLIALSGCIRGQVADLILRGDVKAAEEAAKEYADIFGRDNFFLELQYHGLAAEK
KANFWMRSIAERLGIGLVATNDVHYLQPSDAGTHRVLLAVQTLSALGEAASLPGNQHYLK
SPAEMEALFREIPGALENTVAIAERCDVRLPLGGTKLPEIALPEGVSADDYLRKLCFQGA
AARYGRPLPQEVKDRLNYELSVIKKTGYAGYFLIVKDIVDFARKRGIIVGAGRGSAAGSL
AAYVLGITDVDPLKYGLIFERFLNPERISPPDIDIDLCHLGRREVLEYIRHRFGRERIAH
VGAFSTLQARAALRDTGRALGLAYEKIDAACSRIPYSHINLEDALKESPHLSSLVKNDAG
VRRAFAIARKLQGLPRHMTQHSAGVAIADRPLTEYVPLQRASGEEIITQADMYALEELGL
VKIDLLGLRFLTVIGETLKLVRDRYGIDMKPEEIPLDDEKTYMVLARGDTGGCFQLESGG
MRKMLRRIKPKNIEDLSAVLALYRPGPLKSGMAEEFIARRQGIKPVSYIHPALEPVLRDT
YGVFVYQEQLMQAACLISGYTPGEADLLRRAIAKKKKDEIEREKPRFLKRAVERGIDEKT
AGELFATLEAFGDYGFNKSHSISYAVMAYRTVYLREHFPLEYFASLFNLYMDTPSRLQLY
LCEARRREIRLLLPDINMSGAGFVPEGGPHQRAIRAGLALIKNLGPRGMEEILQAREDCP
FTGFFDFCRRVDRRVINARALESLVFSGAFDSFGIPRPALIISLKWMLSGCSGRPQNQLC
LLNENPDVEALAADLSVADFTPSQKMAQEMMSMGYYITAHPMEFIKGRPEETCTHTASDV
EEIGEKQRVRISGILLDLRSGRTRSGERMLFARLEDLTGSVELVIFPRQLRLFAPWIYVG
SVVLVEGWVDLNDDGHRTVVAEEIRPLTGCDLTTSREGRCP
NT seq 3186 nt   +upstreamnt  +downstreamnt
gtggccttctgtcaccttcacgtccattcggaatacagcctgctcgacggcctgtgccgc
ctgcccctgctggtgaagaaggcggcggaacttgccatgcctgccctggccctgaccgac
cacggcggcctctacggcatggttcccttttacaggctatgcctggaggcgggcataaag
cccatactgggatgcgaggtatacgtggtcgaggatgtaacctgccggtgggggaaggaa
tctttccaccacctggtgctgctttcggaaaaccaggaagggttcaaaaacctgctctcc
ctggtcacccgttcccatgtggacggcttttactaccgccccagggttgacaaaaagctc
ctcgcatcgcacgccaagggtttaattgctttgagcggctgcatccggggccaggtggcg
gacctcatccttcgcggagacgtaaaagctgccgaggaagcggcaaaagagtatgcggac
atcttcggccgggacaacttctttctggagctccaataccacgggcttgccgccgagaaa
aaggccaacttctggatgaggtccatcgccgaaaggctgggaatcgggctcgtggccacc
aacgacgtccactacctgcagccctcggacgccggaacccacagggtgctgctcgcggtc
cagaccctctccgctctgggcgaagcggcgtctctgccgggaaaccagcattacctcaaa
agccccgcggaaatggaggctttgttccgtgagatccccggggccctcgaaaacaccgta
gccatagcggagaggtgtgacgtacgccttcccctgggagggactaaactgccggaaata
gccctgcccgaaggggttagcgccgacgactatctgcgaaaactttgttttcagggggca
gctgcgcgatacggccgcccgctgccgcaggaggtgaaggatagacttaattacgagctt
tcggtgataaaaaagaccggctacgccggctactttctcatagtcaaggacatcgtggat
tttgcccgcaaaaggggaatcatcgtaggggcagggcgcggttcggcggccggaagcctg
gcggcctacgtgctcggcataaccgacgtggatcccttaaaatacggcctcatcttcgag
aggtttttgaatcccgaaaggataagcccgccggatatcgacatcgacctgtgccacctg
gggaggcgggaagtgctggaatacataaggcaccgcttcggcagggagcgcatcgcccac
gtgggcgccttttccacccttcaggcgcgggctgcactcagggacacggggcgcgccctg
ggccttgcctacgaaaaaatagacgccgcctgctcccgcattccttactcccacataaac
ctggaagatgcgctaaaggaaagcccgcacctttcttcccttgtcaaaaacgacgccggg
gtccgccgggcctttgccatcgcccgcaagctccaggggcttccccgccatatgacccag
cactcggcaggggtggcgatagccgacaggccccttaccgaatacgtgccgctccagcgc
gcatcgggtgaggagataataacccaggcggacatgtacgccctggaagagctgggcctt
gtgaaaatagaccttttggggctcaggtttttgaccgtcatcggcgagacgctgaagctg
gtccgggatcggtacggcatcgatatgaaaccggaggaaataccccttgacgacgaaaaa
acgtatatggtcctggcccggggagatacgggaggctgtttccaactggaatccggaggc
atgaggaaaatgctgagaaggataaagcccaaaaacatcgaggacctgtccgcggtcctt
gccctgtaccgccccggccccttaaagagcggcatggccgaagaattcatagcccgccgc
cagggcataaagccggtttcgtatatccaccccgccctggaaccggtgctcagggatacc
tacggcgtattcgtctatcaggaacagctcatgcaggcggcctgccttatatccggctat
acgcccggagaggcggacctgctgcgccgggccatcgccaaaaagaaaaaagatgagata
gagagggaaaaaccccggttcctgaagcgggcggtggaaaggggcatcgatgaaaaaacc
gccggggaattgttcgccaccctggaggccttcggagactacggctttaacaagtcccac
agcatatcctacgccgtcatggcttaccgcaccgtttacctgcgggagcattttcccctg
gaatatttcgcatcgctttttaacctttacatggacactccgtcgcgcctgcagctttac
ctgtgtgaagcccgccgccgggaaatccggctgcttttgccggacataaacatgagcggc
gcggggtttgtacccgaaggtggaccgcaccagcgcgccatacgagccggcctcgccctt
ataaagaacctggggccccgggggatggaggaaatcctgcaggcccgcgaggactgcccc
tttacaggttttttcgatttctgccgccgggtggaccggagggtcataaacgccagggct
ctggagtccctggtgttttcgggggccttcgactccttcggcataccccgtcccgcgctc
atcatctccctgaaatggatgctttccgggtgctccggccggcctcaaaaccagctctgc
ctcctgaacgaaaatccggacgttgaagccctggccgcagacctttccgtggctgacttc
acccccagccagaagatggcccaggagatgatgtcaatgggctactacattacagcccac
ccgatggaatttataaaaggaaggccggaggaaacctgtacccataccgcttcggacgtg
gaagaaattggcgaaaagcaaagggtcaggatctcaggcatactgctggatctccggtcg
ggcaggacccgcagcggcgagcgcatgttgttcgccaggctggaagacctcaccggctcg
gtggagctcgtaattttcccccgtcagttgcgcctttttgccccctggatttacgtgggc
tccgttgtattggtggaaggctgggtggacctgaacgacgacggccaccggaccgtagtg
gcggaggaaatccggcctctcacaggctgcgaccttacaacttcccgggaaggccggtgc
ccgtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (41)   

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