KEGG   Thermosediminibacter oceani: Toce_0164
Entry
Toce_0164         CDS       T01289                                 
Name
(GenBank) lysyl-tRNA synthetase
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
toc  Thermosediminibacter oceani
Pathway
toc00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:toc00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Toce_0164
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:toc01007]
    Toce_0164
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:toc03016]
    Toce_0164
Enzymes [BR:toc01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     Toce_0164
Amino acid related enzymes [BR:toc01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   Toce_0164
Transfer RNA biogenesis [BR:toc03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    Toce_0164
 Prokaryotic type
   Other AARSs
    Toce_0164
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon
Other DBs
NCBI-ProteinID: ADL06955
UniProt: D9S027
Position
157250..158722
AA seq 490 aa
MGNLELEANEIIRARLQKLEELRSMGIAPYGQKYVRTHNCLEIKENFEKLEGSETSIAGR
IMAIRGHGKAAFFDIQDEKGRLQIYIKKDHVGDEVYEIFKKLDIGDIIGVEGKIFKTQKG
EISVMADRITVLAKSLRPLPEKWHGLKDVDTRYRQRYLDLIVNPDVRRTFVTRSKIIRAI
RNYLDSRGFIEVETPVLTPLAGGAAARPFITHHNALDIDLYLRIATELYLKRLIVGGFEK
VYEIGKDFRNEGISIKHNPEFTMIELYQAYADYQDMMELTEDMISHVAKEVLGTTKVVYQ
GEEIDLTPPWTRMTMVEAVKKYAGVDFNELKTDEEARAVARKLGLEVGDNDTRGKVLNTI
FEEKVEEHLVQPTFILDYPIEISPLAKRKEDNPDFTYRFELFITRRETANAFSELNDPID
QRERFLQQLKEREAGDEEAHAFDEDFINALEYGMPPTGGLGIGIDRLVMLLTDSYSIRDV
ILFPTMRPKS
NT seq 1473 nt   +upstreamnt  +downstreamnt
atggggaatttggagcttgaagccaacgaaataataagggctagactgcagaaactggag
gaactccgttccatggggatagccccatacgggcaaaaatacgttagaactcacaactgc
cttgagatcaaagagaacttcgagaagctcgaaggcagcgagacttctatagccggacga
ataatggccatacggggtcacggcaaggcggctttttttgacattcaggacgaaaagggc
cgcctgcaaatatacataaagaaggaccacgtgggtgacgaagtttacgagatctttaag
aaactcgacatcggggacattataggcgtagaagggaaaatattcaaaactcaaaaaggt
gagatatcggtcatggccgacaggataacggtgctggccaaatctttaagacccctgccc
gagaagtggcacggcttgaaagatgtggatacaagataccgccaacgctacctggacctc
atcgtgaaccccgatgtgaggaggaccttcgtcaccagaagcaaaataataagggctata
aggaactacctggacagtcgcggatttatagaggtagagacgccggtactcacgcctctg
gcgggtggtgcggccgcaaggcccttcataacccaccacaacgcgctcgacattgacctg
tacctgcggatcgccaccgagctttatttaaagaggctcatcgtcggcggctttgaaaag
gtctacgagataggcaaggatttcaggaatgaaggtatatcgataaagcataatcccgaa
ttcacgatgatagaactctaccaggcttacgctgactaccaagatatgatggaacttacc
gaagacatgatttcccacgtggcgaaagaagtgttggggactacgaaggtggtatatcag
ggcgaggaaatagacctcactccaccctggaccagaatgaccatggtggaggctgtaaag
aaatacgccggggtggactttaacgagctgaaaaccgatgaggaggcaagagcggttgcc
agaaaactgggccttgaagttggagataatgataccaggggcaaggttttaaataccata
ttcgaggaaaaggtggaagaacacctggttcagcctacttttatactggactaccccatc
gagatatcgcctctggccaagcgaaaagaggacaaccccgatttcacttaccgattcgag
ctctttataacccgcagggaaacggcaaatgccttttccgagctgaacgacccaatcgat
cagcgggagaggttcctgcagcagctaaaagaacgggaggccggagacgaggaggcccat
gcctttgatgaggacttcataaacgctctggagtacggaatgcctccgacgggagggctc
gggataggcatagatcggctggtaatgctgcttacggactcctattccataagggacgtc
atcctgttccccaccatgaggccaaagtcctaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (73)   
   KEGG ORTHOLOGY (1)   
   RefGene (70)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (90)   

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