KEGG   Thermosediminibacter oceani: Toce_1221
Entry
Toce_1221         CDS       T01289                                 
Name
(GenBank) SSU ribosomal protein S12P methylthiotransferase
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
toc  Thermosediminibacter oceani
Brite
KEGG Orthology (KO) [BR:toc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:toc03009]
    Toce_1221
Enzymes [BR:toc01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     Toce_1221
Ribosome biogenesis [BR:toc03009]
 Prokaryotic type
  ribosomal protein modification factors
   Toce_1221
SSDB
Motif
Pfam: UPF0004 Radical_SAM TRAM_2 TRAM DUF1678 Lar_N
Other DBs
NCBI-ProteinID: ADL07978
UniProt: D9S3K1
Position
complement(1190859..1192184)
AA seq 441 aa
MKEKIGLVSLGCDKNLVDSEYLLGALLENGYVITSDASEADIIIINTCCFINSAKQESID
TILEMAQYKTSGNCKMLIATGCLAQRYGDAILKEIPELDAVIGTGDFHKLPGLIEKLNNS
RLKIITENRSFINYDIKKRVRTSNYFSYVKIAEGCSNCCSYCAIPQIRGPYKSRPIESIK
EEVELLVSQGVKEINLVAQDTTSYGMDISGKPSLPDLLRALVDIKGEFWIRILYAYPTHI
DDELLELISSSTKIAKYLDIPLQHINDRILRLMNRPINSEQIKKLIEKIRIIVPDITIRT
TFIVGFPTESDSDFQELIDFVKIYRFDRVGAFKYSREEGTYAATLKPQVPERVKQERYDQ
LMTVQQVISKMNNEKMLGSTITVLAESYDPARKMFIGRSQKDAPGVDGTVMFQGEVRQLG
RFYRVKITEAFEYDLMGEVVE
NT seq 1326 nt   +upstreamnt  +downstreamnt
gtgaaagaaaaaataggtcttgtatcgctcggatgcgataaaaacctcgtggattctgaa
tacctgctgggagcattattggaaaacggctatgtcattacgagcgatgccagtgaagcg
gatattatcataataaatacctgctgttttataaactcggcaaagcaagagtccatagac
accatccttgaaatggcccagtataaaacaagtggtaactgtaaaatgctgatcgccacc
ggttgtctggcccaacggtacggagatgccattttaaaagaaatacccgaattggatgct
gttatcggaacaggcgattttcacaaattgccgggattaattgagaagttaaataattcg
aggttaaaaattattaccgaaaacaggagctttataaattacgatattaaaaagcgggta
agaacatctaactatttttcctatgtcaagatagccgagggctgcagcaactgctgttct
tattgtgccataccgcagataaggggtccctataaaagcaggcccatagaatccataaaa
gaagaagtagagctcctcgtatcacagggagttaaagaaataaaccttgtagcccaggac
accacgagttacggcatggatatatcgggaaaaccttcgcttccggacctgctaagggct
ctcgtggacatcaaaggcgaattttggatcagaatactatacgcttaccctacgcatata
gacgatgagcttcttgaacttatctcctcgagcaccaaaatagcaaaatatctggacatt
cctttgcagcacataaacgacaggattttaaggcttatgaatagaccaataaattccgaa
cagataaagaagttgatcgaaaagataaggatcattgtacccgatataaccataaggacc
acttttatagtcgggtttccgaccgagtcggactcggattttcaagagctcatcgatttt
gtaaaaatataccgttttgaccgggtgggagctttcaagtattcccgagaagaaggtacg
tatgcggctacgctgaagccccaggtgcccgaaagagttaagcaagagaggtacgaccag
ctcatgacagtccagcaggtcatttcaaagatgaacaatgagaaaatgctcgggtcgacg
ataaccgtgctggccgaaagttacgatccggcaagaaagatgttcattggccgttcacaa
aaagatgccccgggtgtcgacggcaccgtaatgttccagggagaggtacgccagcttggc
cggttctacagggtaaaaattaccgaagctttcgaatacgaccttatgggagaagttgta
gagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (43)   

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