KEGG   Tannerella serpentiformis: BCB71_08620
Entry
BCB71_08620       CDS       T04474                                 
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
toh  Tannerella serpentiformis
Brite
KEGG Orthology (KO) [BR:toh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:toh03032]
    BCB71_08620 (topA)
   03400 DNA repair and recombination proteins [BR:toh03400]
    BCB71_08620 (topA)
Enzymes [BR:toh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     BCB71_08620 (topA)
DNA replication proteins [BR:toh03032]
 Prokaryotic type
  DNA Topoisomerases
   BCB71_08620 (topA)
DNA repair and recombination proteins [BR:toh03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      BCB71_08620 (topA)
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim Toprim_4
Other DBs
NCBI-ProteinID: AOH41175
UniProt: A0A2R4KG76
Position
complement(2103397..2105748)
AA seq 783 aa
MQKNLVIVESPAKAKTIEKFLGKDYRVMSSYGHIRDLSTKELGIDVAHDFKPQYVVPEEK
KKLVAELKKASQDAREVLLASDEDREGEAIAWHLSEALELSPDRTQRIVFHEITKPAILH
ALDTPRGIDINLVNAQQARRVLDRIVGFELSPVLWRKVKPALSAGRVQSVAVRLIVERER
EIARFVSEASFRVVASFLLPDGKTLLKAELNRRLKDRDEAEAFLRACQRPEAAFTIEDTT
KRPVKKSPAPPFTTSTLQQEAARKLGFSVAQTMMVAQRLYESGFITYMRTDSFNLSDMAL
TASRQAITEEYGERYHRLRHYHTKSKGAQEAHEAIRPTNMQAPTISAGAQEMKLYDLIYK
RTIACQMADAELERTTVSIGIGGLTDKFVAVGEVIKFDGFLRVYRESTDDEADAPEQETK
LLPTVNVGDRLTAREIIATERFTQRPPRYTEAGLVHRMEELGIGRPSTYAPTIQTIQNRE
YVVRGDKPGEERKFRVLTLTDGEIAEEVKRETVGADRNKLLPTDVGTVVNDFLTESFPEV
IDYHFTANVEKEFDAIAEGTMEWTEAMDRFYKFFHPIVEKTLAMRTDHRAGERQLGIDPK
SGQPVSVKIGRYGPVAQIGQPDPDNKSAAKPRFASLMKTQSIETITLEEALELFKLPRVI
GEYEGKEMVAATGRFGPFVRFDGLFVSIPKPLEPTSITPDEAIALIEEKRTKESQRHIKT
FAEEPGLEILNGRYGAYIAFEGSNYRLPKDVVPADLTLEDCRRIIAEAADKPKRRVPRRR
SNG
NT seq 2352 nt   +upstreamnt  +downstreamnt
atgcagaagaatttggtgatcgtagagtcgccagcgaaggccaaaacgatcgagaaattt
ttggggaaagactaccgggtgatgtccagctatgggcacatccgcgatctgagcacgaag
gagctgggtatcgacgtggcacacgatttcaagccgcagtatgtggtgcctgaggagaag
aagaaattagtggcggagctgaagaaggcgtcgcaggatgcgcgtgaggtgttgctcgca
tccgatgaggaccgcgagggagaggccatcgcgtggcacctcagtgaggcgctcgaactg
tcgcccgaccgcacgcagcgcatcgtctttcacgagatcacgaagccggccatcctgcat
gcgctcgacacgccgcgaggcatcgacatcaacctcgtcaatgcccaacaggcgcggcgt
gtgctggatcgtatcgtgggctttgaactctcgccggtgctgtggcgcaaggtcaagccg
gcgctgtcggccggacgtgtgcagtcggtggctgtgcgactgatcgtggagcgggagcgc
gagattgcgcggttcgtgtccgaggcgtcgtttcgtgtcgtggcctcgttcctgttgccc
gacggaaagacgctgctcaaggctgagctgaaccgaaggctgaaggatcgcgacgaggcc
gaagccttcctccgcgcctgtcagcgtcccgaggcggcgttcacgatcgaagacaccacg
aagcgcccggtgaagaagtcgcccgcaccgcccttcaccacctctacgctacagcaggag
gcggcccgcaagctgggcttctccgtggcgcagaccatgatggtggctcagcgactgtat
gaatccgggttcatcacctacatgcgtaccgactcgtttaacctcagcgacatggcgctc
acggcctcgcgccaagccatcaccgaggagtacggcgaacgttatcaccgcctgcgccac
taccacaccaagagcaagggtgcacaggaggcacacgaggccattcgtcccaccaacatg
caggcgccaacgatcagtgccggcgcacaagagatgaagctgtacgacctgatctataaa
cgtaccatagcctgccagatggctgacgccgaactggagcgcacgacggtctcgatcggt
atcggaggactcacggacaagttcgtggccgtgggcgaggtgatcaagttcgacggcttc
ctgcgcgtctatcgcgagagtacggacgacgaggccgatgcgccggagcaggaaacgaaa
ctgctgcccacggtgaacgttggcgaccgcctcacggctcgcgagatcatcgccacggag
cgctttacgcagcgtccaccccgatacaccgaggccgggctggtgcatcgcatggaggag
cttgggatcggccgcccctcgacgtatgcaccgacgatccagacgatccagaaccgcgag
tatgtggtgcgtggcgataagccgggcgaggagcggaagttccgcgtgctgacgctcacg
gacggcgagatcgcggaggaggtgaaacgagaaacggtaggcgccgaccgcaacaaactg
ctgccgacggacgtgggcacggtggtcaacgacttcctcaccgagtccttccccgaggtg
atcgattaccacttcacggccaacgtggagaaggagtttgacgccattgcggagggcacg
atggaatggaccgaagcgatggatcgcttctacaaattcttccacccgatcgtggagaag
acgctggccatgcgcacggatcatcgggcgggcgagcgccagttaggcatcgatcccaag
agcgggcagccggtctcagtcaagatcgggcgctacggccccgtggcgcagatcgggcag
ccggatccggacaacaagtcggccgcgaagccgcgtttcgcttcactgatgaagacgcag
tccatcgaaaccatcacgctcgaggaggcactggagctgttcaagttgccgcgcgtcatc
ggcgaatatgagggcaaagagatggtggccgccacggggcgcttcgggccttttgtccgc
ttcgacggcctcttcgtttccatccccaagccgctcgaaccgacttccatcacgcccgac
gaggccatcgcgctgatcgaagagaaacgcacgaaggagtcgcagcgacacatcaaaacg
ttcgccgaagagccggggctggagatcctcaacggtcgctatggcgcgtacatcgccttc
gaggggtcgaactatcggcttccgaaagacgttgtcccggctgatctcacgctggaggat
tgccgtcggatcattgccgaggcggccgacaagcccaagcggcgtgtgccgcggcgtcgg
tcgaacggctga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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