KEGG   Thalassolituus oleivorans MIL-1: TOL_1025
Entry
TOL_1025          CDS       T02529                                 
Name
(GenBank) recJ gene product
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
tol  Thalassolituus oleivorans MIL-1
Pathway
tol03410  Base excision repair
tol03430  Mismatch repair
tol03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tol00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    TOL_1025
   03430 Mismatch repair
    TOL_1025
   03440 Homologous recombination
    TOL_1025
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tol03400]
    TOL_1025
DNA repair and recombination proteins [BR:tol03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     TOL_1025
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     TOL_1025
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      TOL_1025
SSDB
Motif
Pfam: RecJ_OB DHHA1 DHH Glyco_transf_4 DUF4774
Other DBs
NCBI-ProteinID: CCU71459
UniProt: M5E1E5
Position
1086332..1088038
AA seq 568 aa
MPRIQSREIPIALGLQSLPPVLQRVYAARGVLAVDELALQLKGLLPYREMKGIDQAVMAL
IPVVTQGKRLLVVGDFDVDGATSTAVALRALRLMGAQNVDYLVPNRFDFGYGLSPELVAV
AVTMKPDLIMTVDNGIASIDGVAAANAAGIAVVVTDHHLAADQLPDALAIVNPNQPGCEF
ASKAACGCTVVFYVMLALRAALDKSGWFSQREAPNMAQLLDLVALASVADVVPLDRNNRI
LVEQGLRRIRAGQGHVGIQALLTVAGREPARIVASDFGFAIGPRLNAAGRLDDMSLGIEC
LLTDDMNRALDIATQLDAFNRDRRSIEQGMQQEALALLAKFEADDHNPVGVCLFQPDWHQ
GVIGILASRIKDKLFRPVIAFAADDNGVLKGSARSIPGLHIRDVIDEVDKRHPGLIKKFG
GHAMAAGMTLNDGAFDAFSRAFDWVCQAHLSSEQLHQTIDSDGNLSIAEFSLELAEQLRW
GGPWGQNFPEPVFDGHFRLVQQRIVGERHLKMVLQPEGSDLALDAIWFNIDPQQWPDQQR
DRVHCAFQLDVNEFRGRQSLQLLIRHLE
NT seq 1707 nt   +upstreamnt  +downstreamnt
atgccgcgtattcaatcgcgagaaattccaattgcactgggcttgcaatcattgcctccg
gtgttgcaacgtgtctacgccgcgcggggtgttttggccgtcgacgagttagcgttgcaa
ttaaaaggcttattgccataccgcgaaatgaaaggcatagaccaagcggttatggcatta
attccggtggtaacccaaggaaagcgtttgctggtggtaggtgattttgacgtggacggt
gcgacaagtaccgcggttgctttgcgcgctctgcgtttaatgggagcacaaaacgtcgat
tatttagtgcctaatcgttttgatttcggttatggcttatcacccgaattagtcgctgtc
gcagtcactatgaaacccgatttaattatgacggtggataatggtatcgcgtctattgat
ggtgttgctgccgcgaatgcggcaggcattgctgtggtggttacagatcaccatttagcc
gctgatcaacttcctgatgcactcgctattgttaatcctaatcagccagggtgtgagttt
gcgagtaaagcagcatgcggttgtactgtggtgttttatgtcatgctcgcgttacgagca
gcgctggataaaagtggttggtttagccaacgagaagcaccgaatatggcgcaattattg
gatttagtggcactcgcaagtgtcgcagatgtggtaccgcttgatcgtaataatcgaatt
ctggttgaacaaggtttacggcgtattcgtgcagggcaagggcacgttggtattcaggct
ttattgacggtggctgggcgtgagccagcacggattgtagcgtcggattttggctttgcg
attggccctcgtctcaatgccgcaggacggttggatgatatgtctttgggtatcgaatgc
ttattaaccgacgatatgaatcgggcgttggatattgcgactcagcttgatgcgtttaat
cgtgatcgtcgttcgattgagcagggtatgcaacaagaagcgctagccttattggccaag
tttgaggcagatgatcacaaccccgtgggggtatgtttgtttcaacccgattggcatcaa
ggtgtgattggtattttagcctcgcgtattaaagataaattatttcgtccagtgattgct
tttgcagcggatgataatggcgtattgaaaggttccgcacgttcaattccggggttacat
attcgggatgtgattgacgaagtggataagcgtcacccaggtttaattaagaaatttggt
ggccatgcgatggccgccggtatgactttgaacgatggtgcttttgatgcctttagtcgt
gcatttgattgggtgtgccaagcgcatttatcgtcagagcaattgcatcaaaccattgat
agcgatggcaatttgtcgatagctgaatttagtttagagctagctgaacagttacgctgg
ggtggcccttgggggcagaacttccctgagccagtgtttgatggtcattttcgcttagta
cagcagcggatcgtgggcgaacgtcatttaaagatggtactgcaaccagagggatctgat
ctcgccttggatgcaatatggtttaatatcgatcctcagcagtggcccgatcaacagcga
gatcgagtgcattgcgcatttcaattggatgttaatgagtttcgcgggcgtcagtcattg
cagttgttgattcgtcatttggaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (38)   

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