KEGG   Thalassolituus oleivorans MIL-1: TOL_1775
Entry
TOL_1775          CDS       T02529                                 
Name
(GenBank) excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
tol  Thalassolituus oleivorans MIL-1
Pathway
tol03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tol00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    TOL_1775
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tol03400]
    TOL_1775
DNA repair and recombination proteins [BR:tol03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     TOL_1775
SSDB
Motif
Pfam: UvrC_RNaseH_dom GIY-YIG UVR HHH_5 HHH HHH_2 DUF4602 HHH_3 5_3_exonuc
Other DBs
NCBI-ProteinID: CCU72196
UniProt: M5DRY5
Position
complement(1899657..1901417)
AA seq 586 aa
MYSLDSELLYVGKAKNLKNRVSSYFRARGLNAKTVALVSRIDHIEITVTGSEAEALLLEQ
TLIKKHRPQYNILLKDDKSYPYLHLSDHAYPLLSYRRGKRKGAGRYFGPYPNSSAVREAL
SYLQRLFQIRSCEDSYFNHRSRPCLQHEIKRCSAPCVGIISADDYRRDIEHATLFLEGNS
RVLLQALQASMTAAAEALQFERAGEIRDQIELLRRIQERQFVERGDHNADVWAVIEWQEI
LCVQRMTFRAGRMVNSQSFFPEDRAGDGLETVLISYMSQFYLGGHAADGLPDVIVADVAI
EDLVVLLEALRIQEGAKMTHARGVRGEQRQWLHMAQENARAGAQTRISGRQAAKLKMQKV
AELLGLAAAPGRIECFDISHAQGEAAYASCVVYGDEGLDKKRYRRFSVKEVTAGDDYAAL
ENAVTRHLTRLKDQDDLPGLLLIDGGKGQINRISTVLENLAISNLPAFGISKGTTRKSGW
EYLWEAGAERPIMPNAHDEGFRLLQHVRDEAHRFAITGHRKERAKSRGQSEIESLPGIGP
KRRKELLLHFGSLKNMRGAPKEEIERVPGISKTLAAQIFARLHGEE
NT seq 1761 nt   +upstreamnt  +downstreamnt
atgtatagccttgattctgagttgctatatgttggtaaagcaaaaaacctcaaaaatcgg
gtttctagttattttcgagcccgcggtctcaatgcgaaaacggttgcgttggtttcgcgg
attgaccatatcgaaattaccgtcactggcagtgaggctgaggccttgctgcttgaacag
acgctaattaaaaagcatcgccctcagtacaatattttgctgaaggatgataagtcatac
ccgtatctgcatctctctgatcatgcgtatccattactaagttatcgtcgaggaaagcgt
aagggtgccgggcgttattttggcccctatccaaactcttctgcagtaagggaggcgctt
agctatttacagcggctgttccaaattcgctcctgcgaagattcctattttaatcatcgt
agtcgaccttgtttgcagcacgagattaagcgctgttcggcaccctgcgtaggtattatt
agtgcagatgattatcgtcgtgatattgagcatgcgacgttatttctcgaaggtaacagt
cgggttttgctgcaagccctacaggcgtctatgactgctgcggcggaagctttgcaattt
gagcgcgctggtgaaattcgtgatcaaattgaattgttgcggcgcattcaggagcgacaa
ttcgttgagcgcggtgatcacaatgccgatgtttgggctgtgatcgaatggcaagaaatt
ttgtgtgtacagcgtatgacctttcgagctggaaggatggtaaatagtcaaagtttcttt
ccggaggatagggctggcgacggtttggagacggtactcataagttatatgagtcagttc
tatttgggtgggcatgctgcagatggattgcctgatgttatcgttgcagatgtcgccatt
gaagatttagttgttctgttagaagctttgcgcattcaagaaggtgcgaaaatgactcat
gctcgcggcgttcgtggcgagcagcgtcagtggctgcatatggctcaggaaaatgcccga
gcgggggcgcagactcgtatttcggggcgccaagcagctaaattaaaaatgcaaaaagtg
gctgagctattaggcttggctgccgcgccggggcgcattgaatgcttcgatatcagtcac
gcccaaggggaggcggcttatgcctcctgtgtggtttatggtgatgaaggcttagataaa
aagcgctatcgtcgtttctcggtgaaggaggtgacagcgggggatgactacgcggcgctg
gaaaacgcagtgacacgtcatttgacacgtttgaaagatcaggatgatttaccagggtta
ttgttaattgacggtggtaaagggcagatcaatagaatatcgacggtgctagagaattta
gcgatctctaacttacctgcatttggtatctctaaaggaacgactcgcaagtcaggatgg
gaatatctgtgggaggcaggtgcggagcgacctataatgccgaacgctcatgatgagggt
ttccgtttattgcagcacgtgcgcgatgaagcgcatcgctttgcaattactgggcatcga
aaagaacgagcaaaaagtagaggccagtcggagattgaatcccttccgggtattggccct
aagagacgcaaagaactactgctgcattttggtagtttaaagaatatgcgaggagcgcca
aaagaagaaattgagcgagtcccgggtattagcaagacactcgctgcgcaaatatttgcg
cggctacatggcgaagagtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (36)   

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