KEGG   Tolypothrix sp. PCC 7910: HCG51_23635
Entry
HCG51_23635       CDS       T06504                                 
Name
(GenBank) RNA-binding protein hfq
  KO
K03666  host factor-I protein
Organism
toq  Tolypothrix sp. PCC 7910
Pathway
toq02024  Quorum sensing
toq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:toq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HCG51_23635
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HCG51_23635
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:toq03019]
    HCG51_23635
   03036 Chromosome and associated proteins [BR:toq03036]
    HCG51_23635
Messenger RNA biogenesis [BR:toq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     HCG51_23635
Chromosome and associated proteins [BR:toq03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    HCG51_23635
SSDB
Motif
Pfam: Hfq
Other DBs
NCBI-ProteinID: QIR39396
UniProt: A0A6G9SKH2
Position
complement(5940004..5940240)
AA seq 78 aa
MHTSSPKTLTEFDTSLPSIRQVQNLIKNAAAVDFKLVTGDLLTGRIIWQDPNCVCIVDEH
SQQTTLWKHAIAYIKPKI
NT seq 237 nt   +upstreamnt  +downstreamnt
atgcatacatcatcaccaaaaacccttacagaattcgacacttccctgcccagtattcgg
caagtacaaaacctgattaaaaatgcagcagcagtggatttcaaactggtgacgggcgat
ttacttacaggtaggataatttggcaagatccaaactgtgtctgtattgtggatgaacac
agccaacaaactactctttggaagcacgcgatcgcctacattaagcctaaaatttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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