KEGG T03056: R615

Thalassolituus oleivorans R6-15: R615_00675

Entry

R615_00675        CDS       T03056

Symbol

rsmD

Name

(GenBank) 16S rRNA methyltransferase

K08316

16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]

Organism

tor Thalassolituus oleivorans R6-15

Brite

KEGG Orthology (KO) [BR:tor00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tor03009]
    R615_00675 (rsmD)
Enzymes [BR:tor01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.171  16S rRNA (guanine966-N2)-methyltransferase
     R615_00675 (rsmD)
Ribosome biogenesis [BR:tor03009]
Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    R615_00675 (rsmD)

SSDB

Motif

Pfam:

Cons_hypoth95 Methyltransf_31 MTS Methyltransf_25 TRM Methyltr_RsmB-F RsmJ SAM_MT Methyltransf_12 PCMT PrmA N6_N4_Mtase Methyltransf_15 Methyltrans_SAM Met_10

Other DBs

NCBI-ProteinID:

AHK14677

Position

complement(149936..150490)

AA seq 184 aa
MSKISHHQLRIIGGEWRSRRLRFPAIDGLRPTMDRVRETVFNWLQHDVEGCRVLDAFAGS
GALGFEALSRGAKEVIFLEKHPAAAVQLKENLQTLGASNAQVWAGDALLWLTQNPEPFDL
VFLDPPFGKNLLQPALDSLQLLPGALIYVEHEATLKPQFPDKWQELKCKNTKEFYFRLFE
VEEP

NT seq 555 nt +upstreamnt +downstreamnt
gtgagcaaaatttcgcatcatcaacttcgtatcattggcggcgaatggcgttctcgtcgt
ttacgctttcctgcaatcgatggtctacgcccaacgatggatcgcgtgcgcgaaaccgtg
ttcaattggttgcaacatgacgtagagggctgtcgcgtattggacgcctttgcaggtagc
ggtgcacttggattcgaagcgctatcgcgcggcgcaaaagaggttatttttttagagaag
catcctgctgccgcagtgcaattgaaagaaaacttacagaccttaggcgctagcaatgcg
caggtatgggctggcgacgccttgctgtggctaacgcagaatccagaaccctttgatctg
gtatttcttgacccccctttcgggaaaaacctattacaaccggcgctcgatagcctgcag
ctcttgcccggcgcgttaatctacgtagagcatgaagcgacactgaaaccgcaatttcct
gacaaatggcaggaattgaaatgtaaaaacaccaaggaattttactttcgcttgtttgaa
gtcgaggagccctaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (15)   
   Pfam (15)   
All databases (28)   

Download RDF

DBGET integrated database retrieval system