KEGG   Thalassolituus oleivorans R6-15: R615_05245
Entry
R615_05245        CDS       T03056                                 
Name
(GenBank) RNA polymerase sigma 70
  KO
K02405  RNA polymerase sigma factor FliA
Organism
tor  Thalassolituus oleivorans R6-15
Pathway
tor02020  Two-component system
tor02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:tor00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    R615_05245
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    R615_05245
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tor03021]
    R615_05245
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:tor02035]
    R615_05245
Transcription machinery [BR:tor03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     R615_05245
Bacterial motility proteins [BR:tor02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    R615_05245
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 HTH_23 COMMD1_N MarR_2 HTH_28 UPF0122 CT_C_D
Other DBs
NCBI-ProteinID: AHK15337
Position
1132090..1132824
AA seq 244 aa
MSAGSCLVYSDVQKNNFDQLVREHAGLVKRIAHHMMGRLPDSVQVDDLIQAGMIGLLEAS
RKYDGGKGASFETYAGIRIRGAMLDEIRRGDWAPRSVHRNARRITDAIKQIESEKGRDAD
DSEVAAFLGISQDEYHGILRDSAGCRLFSYEEVAEKSENGFEVFNETAPNPFAGIERDAF
QTQLAEAIKGLPEREQLILALYYDEELNLKEIGAVLGVSESRVSQLHSQATHRLRSRLGD
WLTR
NT seq 735 nt   +upstreamnt  +downstreamnt
atgtctgcgggtagttgtctggtgtactctgacgttcaaaaaaacaatttcgatcagttg
gttcgcgaacacgcaggactggtaaagcgtattgcccatcacatgatgggacgtttaccc
gatagcgtacaggtggacgatcttattcaagccggcatgataggtttgttagaagcatca
cgtaagtacgatggcggtaaaggcgcaagttttgaaacctatgccggtattcgtattcgt
ggcgctatgctggatgaaattcgtcgtggcgactgggctccgcgttccgtgcatcgcaat
gctaggcgaattaccgatgcaattaagcagatagaaagtgagaaaggtcgtgatgccgac
gacagtgaagttgctgcatttcttggtattagccaagatgaatatcatggcattttacgc
gatagcgctggctgccggctgtttagttatgaagaagtcgccgagaaaagtgagaacggc
tttgaagtttttaacgaaactgcccccaatccatttgcaggtatcgagcgagatgccttc
caaactcagctcgcagaagccatcaaagggcttcctgaacgcgaacagctgattctagcc
ctctactacgacgaagagctcaacctcaaggaaatcggcgctgtgctgggcgtcagcgag
tctcgtgtcagtcaattacacagccaagcgacccatcgtttgcgttcacgcttgggcgat
tggcttactcgctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (19)   

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