KEGG   Theileria orientalis: TOT_010000011
Entry
TOT_010000011     CDS       T03460                                 
Name
(RefSeq) exosome complex exonuclease
  KO
K03678  exosome complex component RRP45
Organism
tot  Theileria orientalis
Pathway
tot03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tot00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TOT_010000011
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tot03019]
    TOT_010000011
Messenger RNA biogenesis [BR:tot03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     TOT_010000011
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 20712985
NCBI-ProteinID: XP_009688843
UniProt: J7MBR6
Position
1:complement(join(41990..42094,42124..42219,42250..42352,42383..42450,42482..42586,42616..42864,42898..43062))
AA seq 296 aa
MLREDNEIDFIQNISPDVSTLLIGQECLKKGLRIDGRSLDSHRHVSIEFNGSPGSVTISF
GNTVVFCCISQEIVEPNFERPNEGFLYFNVELSPFTSENYDPGKTSDSENNLIYFLENIF
KESSFLDLETLCVKSGKEVWALRVYVHVLQDDGNLLGACSFAALASLSQYRKPNLQESEE
FTYSSYMLWHKGVPLSIYNMPIMMTVSIMEGQDQYVLDANAFEEKILNTQISILYNQFGE
VFWTYKYGSTPVGLETFEGAVSVSKNKAIKLYSLLKHELEKNSEMLKSLLMCIQSQ
NT seq 891 nt   +upstreamnt  +downstreamnt
atgttgagggaagataacgagattgattttatacagaacattagtccggacgtgtcgacg
ttgttaataggacaagagtgcctgaaaaaaggcctgagaatagatggaaggtcgctggat
tctcaccgccacgtgagtatagagttcaacggatcaccaggaagcgtaacaatatcgttc
ggaaatacagtagtgttttgctgcatatcgcaagaaatagtagagccgaattttgaaaga
ccaaacgaaggatttctctactttaatgtggaactctcaccattcacgtcggaaaactat
gatccaggaaaaacctcagactcggagaataacttaatatatttccttgaaaatatattt
aaggagtcgtcatttttggatctagaaacgctgtgcgtaaagagcggaaaggaggtgtgg
gcgttaagagtatatgtgcacgtgctacaagacgatggaaacctcctaggagcgtgctcg
ttcgcagcactggcatcactatcgcaatatcgcaaaccaaacctacaggaatcagaagag
ttcacatactcgtcctacatgttgtggcacaaaggagtaccactcagcatatacaatatg
ccaataatgatgacagtgtcaataatggaaggacaagaccaatacgttctcgacgcaaac
gcattcgaagaaaaaatattaaacacacaaatatcgatactatataaccaatttggagaa
gtgttttggacatataaatacgggtcgacgccagtgggattggaaacattcgaaggagca
gtctcggtctcaaaaaacaaagcaataaaactatactcgcttctgaaacatgaacttgaa
aaaaatagtgaaatgttgaagagtctactgatgtgtatccagtcacagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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