KEGG   Theileria orientalis: TOT_040000454
Entry
TOT_040000454     CDS       T03460                                 
Name
(RefSeq) RNA polymerase common subunit
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
tot  Theileria orientalis
Pathway
tot03020  RNA polymerase
tot03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tot00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    TOT_040000454
  09124 Replication and repair
   03420 Nucleotide excision repair
    TOT_040000454
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tot03021]
    TOT_040000454
   03400 DNA repair and recombination proteins [BR:tot03400]
    TOT_040000454
Transcription machinery [BR:tot03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     TOT_040000454
  RNA polymerase III system
   RNA polymerase III
     TOT_040000454
  RNA polymerase I system
   RNA polymerase I
     TOT_040000454
DNA repair and recombination proteins [BR:tot03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      TOT_040000454
SSDB
Motif
Pfam: RNA_pol_Rpb6 DUF5102
Other DBs
NCBI-GeneID: 20716515
NCBI-ProteinID: XP_009692379
UniProt: J4C981
Position
4:join(993682..993834,993921..994229)
AA seq 153 aa
MGDLYMDEFGENFGIDEFAEEEEDFGDFEESELQRVADVDIITDPIEYKTQVDSAHRITT
PYLTKYEKARIIGTRALQISLNAPITIPLDGAADMNEENVASLGDFGDTQTAAIDPLIIA
EKELYQKTIPFIIRRYLPNGSYEDWKIEELIID
NT seq 462 nt   +upstreamnt  +downstreamnt
atgggagacctttatatggatgagttcggtgaaaactttggaatcgatgagttcgcggaa
gaggaggaagactttggagactttgaagagtcggagctccaaagggtggcggacgtcgac
ataataacagacccaatcgaatataaaacacaggttgatagtgcccacagaatcactact
ccgtacctaaccaagtacgaaaaggcgagaattattggcacgagggcactgcaaattagt
ctgaacgcgccgatcacgattccgctggacggagcggcggacatgaacgaggagaacgtc
gcgtcgctcggggacttcggagatacgcagaccgcggccatcgacccgctaatcatcgcc
gaaaaggagctgtaccagaagacaatccccttcataataagaaggtacctgcccaacggg
agctacgaggactggaagatagaggagcttataattgattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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